Sulfur Containing Compound Database
Gene name | MYB28 |
AGI ID | AT5G61420 |
Gene length | 366 |
Uniprot ID | Q9SPG2 |
Protein Name | Transcription factor MYB28 |
Synonym | PMG1 |
EC number | N/A |
Entrez Gene | 836263 |
Refseq mrna | NM_180910 |
Refseq protein | NP_851241 |
Function | In a screen for the trans-activation potential of various transcription factors toward GSL biosynthetic genes; MYB28 was identified as a positive regulator of aliphatic methionine-derived GSLs. The content of aliphatic GSLs as well as transcript levels of aliphatic GSL biosynthetic genes were elevated in gain-of-function mutants and decreased in MYB28 RNAi knock-down mutants (Gigolashvili et al. 2007) |
Group | GSL transcription factor / Camalexin biosynthesis |
Reference | Burow et al. (2015); Gigolashvili et al. (2007); Stotz et al. (2011); Sønderby et al. (2007); Sønderby et al. (2010) |
Organism | AGI ID | Gene Name | Protein Name | Identity | E-Value | Description |
---|---|---|---|---|---|---|
Cabbage |
MYB28 |
Transcription factor MYB28 |
79 |
0.00E+00 |
||
Cabbage |
MYB28 |
Transcription factor MYB28 |
77 |
0.00E+00 |
||
Cabbage |
MYB28 |
Transcription factor MYB28 |
60 |
6.00E-128 |
||
Papaya |
MYB28 |
Transcription factor MYB28 |
50 |
1.00E-71 |
||
Cabbage |
MYB28 |
Transcription factor MYB28 |
74 |
2.00E-69 |
||
Broccoli |
MYB28 |
Transcription factor MYB28 |
74 |
2.00E-69 |
||
Cabbage |
MYB28 |
Transcription factor MYB28 |
68 |
3.00E-68 |
||
Cabbage |
MYB28 |
Transcription factor MYB28 |
72 |
2.00E-67 |
||
Broccoli |
MYB28 |
Transcription factor MYB28 |
70 |
2.00E-67 |
||
Cabbage |
MYB28 |
Transcription factor MYB28 |
73 |
3.00E-67 |
||
Cabbage |
MYB28 |
Transcription factor MYB28 |
73 |
7.00E-67 |
||
Cabbage |
MYB28 |
Transcription factor MYB28 |
70 |
7.00E-67 |
||
Papaya |
MYB28 |
Transcription factor MYB28 |
73 |
8.00E-67 |
||
Cabbage |
MYB28 |
Transcription factor MYB28 |
69 |
1.00E-66 |
||
Cabbage |
MYB28 |
Transcription factor MYB28 |
73 |
2.00E-66 |
||
Broccoli |
MYB28 |
Transcription factor MYB28 |
72 |
3.00E-66 |
||
Cabbage |
MYB28 |
Transcription factor MYB28 |
72 |
7.00E-66 |
||
Cabbage |
MYB28 |
Transcription factor MYB28 |
71 |
1.00E-64 |
||
Papaya |
MYB28 |
Transcription factor MYB28 |
70 |
5.00E-63 |
||
Papaya |
MYB28 |
Transcription factor MYB28 |
70 |
7.00E-63 |
||
Cabbage |
MYB28 |
Transcription factor MYB28 |
70 |
7.00E-63 |
||
Papaya |
MYB28 |
Transcription factor MYB28 |
69 |
7.00E-63 |
||
Broccoli |
MYB28 |
Transcription factor MYB28 |
68 |
7.00E-63 |
||
Cabbage |
MYB28 |
Transcription factor MYB28 |
70 |
1.00E-62 |
||
Broccoli |
MYB28 |
Transcription factor MYB28 |
69 |
1.00E-62 |
||
Cabbage |
MYB28 |
Transcription factor MYB28 |
69 |
2.00E-62 |
||
Papaya |
MYB28 |
Transcription factor MYB28 |
68 |
9.00E-62 |
||
Papaya |
MYB28 |
Transcription factor MYB28 |
69 |
2.00E-61 |
||
Broccoli |
MYB28 |
Transcription factor MYB28 |
70 |
4.00E-61 |
||
Broccoli |
MYB28 |
Transcription factor MYB28 |
64 |
4.00E-59 |
||
Broccoli |
MYB28 |
Transcription factor MYB28 |
62 |
1.00E-58 |
||
Broccoli |
MYB28 |
Transcription factor MYB28 |
73 |
2.00E-58 |
||
Papaya |
MYB28 |
Transcription factor MYB28 |
64 |
2.00E-58 |
||
Broccoli |
MYB28 |
Transcription factor MYB28 |
61 |
4.00E-58 |
||
Papaya |
MYB28 |
Transcription factor MYB28 |
64 |
1.00E-57 |
||
Broccoli |
MYB28 |
Transcription factor MYB28 |
58 |
2.00E-57 |
||
Papaya |
MYB28 |
Transcription factor MYB28 |
60 |
5.00E-57 |
||
Broccoli |
MYB28 |
Transcription factor MYB28 |
69 |
8.00E-57 |
||
Broccoli |
MYB28 |
Transcription factor MYB28 |
53 |
2.00E-56 |
||
Papaya |
MYB28 |
Transcription factor MYB28 |
59 |
2.00E-56 |
||
Papaya |
MYB28 |
Transcription factor MYB28 |
59 |
3.00E-56 |
||
Papaya |
MYB28 |
Transcription factor MYB28 |
65 |
5.00E-56 |
||
Papaya |
MYB28 |
Transcription factor MYB28 |
70 |
1.00E-55 |
||
Papaya |
MYB28 |
Transcription factor MYB28 |
63 |
2.00E-55 |
||
Papaya |
MYB28 |
Transcription factor MYB28 |
60 |
3.00E-55 |
||
Papaya |
MYB28 |
Transcription factor MYB28 |
58 |
7.00E-55 |
||
Papaya |
MYB28 |
Transcription factor MYB28 |
63 |
1.00E-54 |
||
Papaya |
MYB28 |
Transcription factor MYB28 |
62 |
5.00E-54 |
||
Papaya |
MYB28 |
Transcription factor MYB28 |
63 |
5.00E-54 |
||
Broccoli |
MYB28 |
Transcription factor MYB28 |
60 |
1.00E-53 |
||
Papaya |
MYB28 |
Transcription factor MYB28 |
59 |
3.00E-53 |
||
Papaya |
MYB28 |
Transcription factor MYB28 |
61 |
5.00E-53 |
||
Broccoli |
MYB28 |
Transcription factor MYB28 |
61 |
8.00E-53 |
||
Broccoli |
MYB28 |
Transcription factor MYB28 |
60 |
4.00E-52 |
||
Papaya |
MYB28 |
Transcription factor MYB28 |
62 |
5.00E-52 |
||
Papaya |
MYB28 |
Transcription factor MYB28 |
59 |
6.00E-52 |
||
Broccoli |
MYB28 |
Transcription factor MYB28 |
55 |
1.00E-51 |
||
Papaya |
MYB28 |
Transcription factor MYB28 |
58 |
2.00E-51 |
||
Broccoli |
MYB28 |
Transcription factor MYB28 |
57 |
2.00E-51 |
||
Papaya |
MYB28 |
Transcription factor MYB28 |
62 |
6.00E-51 |
||
Papaya |
MYB28 |
Transcription factor MYB28 |
65 |
9.00E-51 |
GO ID | Ontology | GO Term | Description |
---|---|---|---|
MF |
RNA polymerase II transcription factor activity, sequence-specific DNA binding |
Interacting selectively and non-covalently with a specific DNA sequence in order to modulate transcription by RNA polymerase II. |
|
MF |
transcription factor activity, RNA polymerase II transcription factor recruiting |
Interacting selectively and non-covalently with a sequence of DNA that is in cis with and relatively close to a core promoter for RNA polymerase II (RNAP II) in order to activate or increase the frequency, rate or extent of transcription from the RNAP II |
|
MF |
DNA binding |
Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). |
|
MF |
transcription factor activity, sequence-specific DNA binding |
A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a gene in order to modulate transcription. Regulatory regions include promoter |
|
CC |
nucleus |
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some |
|
BP |
transcription, DNA-templated |
The cellular synthesis of RNA on a template of DNA. |
|
BP |
regulation of transcription, DNA-templated |
Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. |
|
BP |
regulation of transcription from RNA polymerase II promoter |
Any process that modulates the frequency, rate or extent of transcription mediated by RNA polymerase II. |
|
BP |
response to bacterium |
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a bacterium. |
|
BP |
response to insect |
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from an insect. |
|
BP |
induced systemic resistance |
A response to non-pathogenic bacteria that confers broad spectrum systemic resistance to disease that does not depend upon salicylic acid signaling. |
|
BP |
response to gibberellin |
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gibberellin stimulus. |
|
BP |
response to salicylic acid |
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a salicylic acid stimulus. |
|
BP |
response to jasmonic acid |
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a jasmonic acid stimulus. |
|
BP |
cellular response to sulfur starvation |
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of sulfur. |
|
BP |
regulation of glucosinolate biosynthetic process |
Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of glucosinolates, substituted thioglucosides found in rapeseed products and related cruciferae. |
|
BP |
cell differentiation |
The process in which relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable pha |
|
MF |
sequence-specific DNA binding |
Interacting selectively and non-covalently with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding. |
|
MF |
transcription regulatory region DNA binding |
Interacting selectively and non-covalently with a DNA region that regulates the transcription of a region of DNA, which may be a gene, cistron, or operon. Binding may occur as a sequence specific interaction or as an interaction observed only once a facto |
|
BP |
defense response to fungus |
Reactions triggered in response to the presence of a fungus that act to protect the cell or organism. |
Pubmed ID | Authors | Year | Title | Journal | Description |
---|---|---|---|---|---|
Burow, M., Atwell, S., Francisco, M., Kerwin, R.E., Halkier, B.A. & Kliebenstein, D.J. |
2015 |
The Glucosinolate Biosynthetic Gene AOP2 Mediates Feed-back Regulation of Jasmonic Acid Signaling in Arabidopsis |
Mol Plant |
||
Gigolashvili, T., Yatusevich, R., Berger, B., M?ller, C. & Fl?gge, U.-I. |
2007 |
The R2R3-MYB transcription factor HAG1/MYB28 is a regulator of methionine-derived glucosinolate biosynthesis in Arabidopsis thaliana |
Plant Journal |
||
S?nderby, I.E., Hansen, B.G., Bjarnholt, N., Ticconi, C., Halkier, B.A. & Kliebenstein, D.J. |
2007 |
A systems biology approach identifies a R2R3 MYB gene subfamily with distinct and overlapping functions in regulation of aliphatic glucosinolates |
PLoS One |
||
S?nderby, I.E., Geu-Flores, F. & Halkier, B.A. |
2010 |
Biosynthesis of glucosinolates--gene discovery and beyond |
Trends Plant Sci |