SuCComBase

GO:0000981

MF

RNA polymerase II transcription factor activity, sequence-specific DNA binding

Interacting selectively and non-covalently with a specific DNA sequence in order to modulate transcription by RNA polymerase II.

GO:0001135

MF

transcription factor activity, RNA polymerase II transcription factor recruiting

Interacting selectively and non-covalently with a sequence of DNA that is in cis with and relatively close to a core promoter for RNA polymerase II (RNAP II) in order to activate or increase the frequency, rate or extent of transcription from the RNAP II

GO:0003677

MF

DNA binding

Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).

GO:0003700

MF

transcription factor activity, sequence-specific DNA binding

A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a gene in order to modulate transcription. Regulatory regions include promoter

GO:0005634

CC

nucleus

A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some

GO:0006351

BP

transcription, DNA-templated

The cellular synthesis of RNA on a template of DNA.

GO:0006355

BP

regulation of transcription, DNA-templated

Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.

GO:0006357

BP

regulation of transcription from RNA polymerase II promoter

Any process that modulates the frequency, rate or extent of transcription mediated by RNA polymerase II.

GO:0009414

BP

response to water deprivation

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a water deprivation stimulus, prolonged deprivation of water.

GO:0009611

BP

response to wounding

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to the organism.

GO:0009617

BP

response to bacterium

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a bacterium.

GO:0009625

BP

response to insect

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from an insect.

GO:0009644

BP

response to high light intensity

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a high light intensity stimulus.

GO:0009682

BP

induced systemic resistance

A response to non-pathogenic bacteria that confers broad spectrum systemic resistance to disease that does not depend upon salicylic acid signaling.

GO:0009739

BP

response to gibberellin

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gibberellin stimulus.

GO:0009751

BP

response to salicylic acid

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a salicylic acid stimulus.

GO:0009753

BP

response to jasmonic acid

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a jasmonic acid stimulus.

GO:0009755

BP

hormone-mediated signaling pathway

A series of molecular signals mediated by the detection of a hormone.

GO:0009819

BP

drought recovery

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of prolonged deprivation of water that restores that organism to a normal (non-stres

GO:0009867

BP

jasmonic acid mediated signaling pathway

A series of molecular signals mediated by jasmonic acid.

GO:0010105

BP

negative regulation of ethylene-activated signaling pathway

Any process that stops or prevents ethylene (ethene) signal transduction.

GO:0010438

BP

cellular response to sulfur starvation

Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of sulfur.

GO:0010439

BP

regulation of glucosinolate biosynthetic process

Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of glucosinolates, substituted thioglucosides found in rapeseed products and related cruciferae.

GO:0030154

BP

cell differentiation

The process in which relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable pha

GO:0031930

BP

mitochondria-nucleus signaling pathway

A series of molecular signals that forms a pathway of communication from the mitochondria to the nucleus and initiates cellular changes in response to changes in mitochondrial function.

GO:0043565

MF

sequence-specific DNA binding

Interacting selectively and non-covalently with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding.

GO:0044212

MF

transcription regulatory region DNA binding

Interacting selectively and non-covalently with a DNA region that regulates the transcription of a region of DNA, which may be a gene, cistron, or operon. Binding may occur as a sequence specific interaction or as an interaction observed only once a facto

GO:0050832

BP

defense response to fungus

Reactions triggered in response to the presence of a fungus that act to protect the cell or organism.

GO:1905255

BP

regulation of RNA binding transcription factor activity

Any process that modulates the frequency, rate or extent of RNA binding transcription factor activity.

GO:2000070

BP

regulation of response to water deprivation

Any process that modulates the frequency, rate or extent of response to water deprivation.

25758208

Burow, M., Atwell, S., Francisco, M., Kerwin, R.E., Halkier, B.A. & Kliebenstein, D.J.

2015

The Glucosinolate Biosynthetic Gene AOP2 Mediates Feed-back Regulation of Jasmonic Acid Signaling in Arabidopsis

Mol Plant

Link

18094747

S?nderby, I.E., Hansen, B.G., Bjarnholt, N., Ticconi, C., Halkier, B.A. & Kliebenstein, D.J.

2007

A systems biology approach identifies a R2R3 MYB gene subfamily with distinct and overlapping functions in regulation of aliphatic glucosinolates

PLoS One

Link

20303821

S?nderby, I.E., Geu-Flores, F. & Halkier, B.A.

2010

Biosynthesis of glucosinolates--gene discovery and beyond

Trends Plant Sci

Link

18042203

Gigolashvili, T., Engqvist, M., Yatusevich, R., M?ller, C. & Fl?gge, U.I.

2008

HAG2/MYB76 and HAG3/MYB29 exert a specific and coordinated control on the regulation of aliphatic glucosinolate biosynthesis in Arabidopsis thaliana

New Phytologist

Link