Sulfur Containing Compound Database
Gene name | MYB34 |
AGI ID | AT5G60890 |
Gene length | 295 |
Uniprot ID | O64399 |
Protein Name | Transcription factor MYB34 |
Synonym | ATMYB34 |
EC number | N/A |
Entrez Gene | 836210 |
Refseq mrna | NM_125482 |
Refseq protein | NP_200897 |
Function | MYB34; MYB51 and MYB122 act together to control the biosynthesis of indole-3-ylmethyl-GSL (I3M) in shoots and roots with MYB34 controlling biosynthesis of indolic GSLs (IGs) mainly in the roots. MYB51 regulating biosynthesis in shoots and MYB122 having an accessory role in the biosynthesis of IGs (Frerigmann & Gigolashvili 2014) |
Group | GSL transcription factor / Camalexin biosynthesis |
Reference | Celenza et al. (2005); Frerigmann & Gigolashvili (2014) ; Frerigmann et al. (2015) |
Organism | AGI ID | Gene Name | Protein Name | Identity | E-Value | Description |
---|---|---|---|---|---|---|
Cabbage |
MYB34 |
Transcription factor MYB34 |
75 |
5.00E-161 |
||
Broccoli |
MYB34 |
Transcription factor MYB34 |
75 |
2.00E-159 |
||
Cabbage |
MYB34 |
Transcription factor MYB34 |
75 |
2.00E-155 |
||
Cabbage |
MYB34 |
Transcription factor MYB34 |
72 |
3.00E-146 |
||
Cabbage |
MYB34 |
Transcription factor MYB34 |
74 |
3.00E-141 |
||
Broccoli |
MYB34 |
Transcription factor MYB34 |
45 |
2.00E-81 |
||
Cabbage |
MYB34 |
Transcription factor MYB34 |
63 |
2.00E-80 |
||
Papaya |
MYB34 |
Transcription factor MYB34 |
55 |
4.00E-80 |
||
Cabbage |
MYB34 |
Transcription factor MYB34 |
63 |
3.00E-77 |
||
Broccoli |
MYB34 |
Transcription factor MYB34 |
59 |
1.00E-76 |
||
Broccoli |
MYB34 |
Transcription factor MYB34 |
49 |
2.00E-76 |
||
Cabbage |
MYB34 |
Transcription factor MYB34 |
72 |
5.00E-68 |
||
Cabbage |
MYB34 |
Transcription factor MYB34 |
72 |
5.00E-68 |
||
Cabbage |
MYB34 |
Transcription factor MYB34 |
72 |
2.00E-67 |
||
Papaya |
MYB34 |
Transcription factor MYB34 |
72 |
9.00E-67 |
||
Cabbage |
MYB34 |
Transcription factor MYB34 |
71 |
3.00E-66 |
||
Papaya |
MYB34 |
Transcription factor MYB34 |
71 |
3.00E-66 |
||
Cabbage |
MYB34 |
Transcription factor MYB34 |
70 |
5.00E-66 |
||
Cabbage |
MYB34 |
Transcription factor MYB34 |
71 |
4.00E-65 |
||
Papaya |
MYB34 |
Transcription factor MYB34 |
70 |
2.00E-64 |
||
Cabbage |
MYB34 |
Transcription factor MYB34 |
69 |
6.00E-64 |
||
Broccoli |
MYB34 |
Transcription factor MYB34 |
69 |
7.00E-64 |
||
Papaya |
MYB34 |
Transcription factor MYB34 |
68 |
1.00E-63 |
||
Cabbage |
MYB34 |
Transcription factor MYB34 |
68 |
2.00E-63 |
||
Broccoli |
MYB34 |
Transcription factor MYB34 |
67 |
3.00E-63 |
||
Broccoli |
MYB34 |
Transcription factor MYB34 |
67 |
4.00E-62 |
||
Papaya |
MYB34 |
Transcription factor MYB34 |
68 |
8.00E-62 |
||
Broccoli |
MYB34 |
Transcription factor MYB34 |
69 |
9.00E-62 |
||
Cabbage |
MYB34 |
Transcription factor MYB34 |
68 |
2.00E-61 |
||
Broccoli |
MYB34 |
Transcription factor MYB34 |
68 |
3.00E-61 |
||
Cabbage |
MYB34 |
Transcription factor MYB34 |
66 |
3.00E-61 |
||
Cabbage |
MYB34 |
Transcription factor MYB34 |
68 |
4.00E-61 |
||
Broccoli |
MYB34 |
Transcription factor MYB34 |
51 |
3.00E-60 |
||
Papaya |
MYB34 |
Transcription factor MYB34 |
65 |
7.00E-60 |
||
Papaya |
MYB34 |
Transcription factor MYB34 |
67 |
1.00E-59 |
||
Papaya |
MYB34 |
Transcription factor MYB34 |
59 |
2.00E-59 |
||
Broccoli |
MYB34 |
Transcription factor MYB34 |
72 |
3.00E-59 |
||
Broccoli |
MYB34 |
Transcription factor MYB34 |
64 |
5.00E-59 |
||
Papaya |
MYB34 |
Transcription factor MYB34 |
62 |
6.00E-59 |
||
Papaya |
MYB34 |
Transcription factor MYB34 |
65 |
1.00E-58 |
||
Papaya |
MYB34 |
Transcription factor MYB34 |
61 |
3.00E-58 |
||
Papaya |
MYB34 |
Transcription factor MYB34 |
57 |
5.00E-58 |
||
Broccoli |
MYB34 |
Transcription factor MYB34 |
68 |
5.00E-58 |
||
Papaya |
MYB34 |
Transcription factor MYB34 |
65 |
6.00E-58 |
||
Broccoli |
MYB34 |
Transcription factor MYB34 |
62 |
8.00E-58 |
||
Papaya |
MYB34 |
Transcription factor MYB34 |
63 |
1.00E-56 |
||
Papaya |
MYB34 |
Transcription factor MYB34 |
63 |
1.00E-56 |
||
Papaya |
MYB34 |
Transcription factor MYB34 |
60 |
5.00E-56 |
||
Papaya |
MYB34 |
Transcription factor MYB34 |
66 |
6.00E-56 |
||
Broccoli |
MYB34 |
Transcription factor MYB34 |
59 |
4.00E-55 |
||
Papaya |
MYB34 |
Transcription factor MYB34 |
58 |
6.00E-55 |
||
Broccoli |
MYB34 |
Transcription factor MYB34 |
59 |
1.00E-54 |
||
Papaya |
MYB34 |
Transcription factor MYB34 |
68 |
2.00E-54 |
||
Broccoli |
MYB34 |
Transcription factor MYB34 |
58 |
2.00E-54 |
||
Broccoli |
MYB34 |
Transcription factor MYB34 |
60 |
3.00E-54 |
||
Broccoli |
MYB34 |
Transcription factor MYB34 |
53 |
4.00E-54 |
||
Papaya |
MYB34 |
Transcription factor MYB34 |
60 |
4.00E-54 |
||
Papaya |
MYB34 |
Transcription factor MYB34 |
64 |
2.00E-53 |
||
Papaya |
MYB34 |
Transcription factor MYB34 |
55 |
3.00E-53 |
||
Papaya |
MYB34 |
Transcription factor MYB34 |
64 |
5.00E-53 |
||
Papaya |
MYB34 |
Transcription factor MYB34 |
60 |
2.00E-52 |
||
Broccoli |
MYB34 |
Transcription factor MYB34 |
64 |
2.00E-52 |
||
Papaya |
MYB34 |
Transcription factor MYB34 |
57 |
3.00E-51 |
||
Papaya |
MYB34 |
Transcription factor MYB34 |
62 |
9.00E-51 |
||
Broccoli |
MYB34 |
Transcription factor MYB34 |
53 |
1.00E-50 |
GO ID | Ontology | GO Term | Description |
---|---|---|---|
BP |
tryptophan biosynthetic process |
The chemical reactions and pathways resulting in the formation of tryptophan, the chiral amino acid 2-amino-3-(1H-indol-3-yl)propanoic acid; tryptophan is synthesized from chorismate via anthranilate. |
|
MF |
RNA polymerase II transcription factor activity, sequence-specific DNA binding |
Interacting selectively and non-covalently with a specific DNA sequence in order to modulate transcription by RNA polymerase II. |
|
MF |
transcription factor activity, RNA polymerase II transcription factor recruiting |
Interacting selectively and non-covalently with a sequence of DNA that is in cis with and relatively close to a core promoter for RNA polymerase II (RNAP II) in order to activate or increase the frequency, rate or extent of transcription from the RNAP II |
|
BP |
defense response to insect |
A response to protect an organism from a directly detected or perceived external threat from an insect or insects to that organism. |
|
MF |
DNA binding |
Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). |
|
MF |
transcription factor activity, sequence-specific DNA binding |
A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a gene in order to modulate transcription. Regulatory regions include promoter |
|
CC |
nucleus |
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some |
|
BP |
transcription, DNA-templated |
The cellular synthesis of RNA on a template of DNA. |
|
BP |
regulation of transcription from RNA polymerase II promoter |
Any process that modulates the frequency, rate or extent of transcription mediated by RNA polymerase II. |
|
BP |
response to jasmonic acid |
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a jasmonic acid stimulus. |
|
BP |
indole glucosinolate biosynthetic process |
The chemical reactions and pathways resulting in the formation of indole glucosinolates, sulfur-containing compounds that have a common structure linked to an R group derived from tryptophan. |
|
BP |
cellular response to sulfur starvation |
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of sulfur. |
|
MF |
kinase activity |
Catalysis of the transfer of a phosphate group, usually from ATP, to a substrate molecule. |
|
BP |
cell differentiation |
The process in which relatively unspecialized cells, e.g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable pha |
|
MF |
sequence-specific DNA binding |
Interacting selectively and non-covalently with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding. |
|
MF |
transcription regulatory region DNA binding |
Interacting selectively and non-covalently with a DNA region that regulates the transcription of a region of DNA, which may be a gene, cistron, or operon. Binding may occur as a sequence specific interaction or as an interaction observed only once a facto |
|
BP |
positive regulation of transcription, DNA-templated |
Any process that activates or increases the frequency, rate or extent of cellular DNA-templated transcription. |
Pubmed ID | Authors | Year | Title | Journal | Description |
---|---|---|---|---|---|
Celenza, J.L., Quiel, J.A., Smolen, G.A., Merrikh, H., Silvestro, A.R., Normanly, J. & Bender, J. |
2005 |
The Arabidopsis ATR1 Myb Transcription Factor Controls Indolic Glucosinolate Homeostasis |
Plant Physiology |
||
Frerigmann, H. & Gigolashvili, T. |
2014 |
Update on the role of R2R3-MYBs in the regulation of glucosinolates upon sulfur deficiency |
Front Plant Sci |