SuCComBase

SCC Gene Description

Gene name	SDI1
AGI ID	AT5G48850
Gene length	306
Uniprot ID	Q8GXU5
Protein Name	Protein SULFUR DEFICIENCY-INDUCED 1
Synonym	AtSDI1
EC number	N/A
Entrez Gene	834943
Refseq mrna	NM_124262.4.
Refseq protein	NP_199696.2
Function	Sulfur deficiency induced 1 (SD1) and SD2 are –S marker genes sulfur deficiency that act as major repressors controlling GSL biosynthesis in Arabidopsis under –S condition. SDI1 and SDI2 expression negatively correlated with GSL biosynthesis in both transcript and metabolite levels. Principal components analysis of transcriptome data indicated that SDI1 regulates aliphatic GSL biosynthesis as part of –S response. SDI1 was localized to the nucleus and interacted with MYB28 a major transcription factor that promotes aliphatic GSL biosynthesis in both yeast and plant cells (Aarabi et al. 2016)
Group	GSL core structure synthesis
Reference	Aarabi et al. (2016)

Organism	AGI ID	Gene Name	Protein Name	Identity	E-Value
Papaya	AT5G48850	SDI1	Protein SULFUR DEFICIENCY-INDUCED 1	69.625	5.97E-143
Papaya	AT5G48850	SDI1	Protein SULFUR DEFICIENCY-INDUCED 1	64.111	5.57E-132
Papaya	AT5G48850	SDI1	Protein SULFUR DEFICIENCY-INDUCED 1	66.834	3.04E-92
Papaya	AT5G48850	SDI1	Protein SULFUR DEFICIENCY-INDUCED 1	65.829	1.06E-85
Broccoli	AT5G48850	SDI1	Protein SULFUR DEFICIENCY-INDUCED 1	91.503	0
Broccoli	AT5G48850	SDI1	Protein SULFUR DEFICIENCY-INDUCED 1	89.677	0
Broccoli	AT5G48850	SDI1	Protein SULFUR DEFICIENCY-INDUCED 1	86.986	0
Broccoli	AT5G48850	SDI1	Protein SULFUR DEFICIENCY-INDUCED 1	61.754	2.84E-108
Broccoli	AT5G48850	SDI1	Protein SULFUR DEFICIENCY-INDUCED 1	58.562	1.02E-105
Broccoli	AT5G48850	SDI1	Protein SULFUR DEFICIENCY-INDUCED 1	58.5	9.12E-79
Broccoli	AT5G48850	SDI1	Protein SULFUR DEFICIENCY-INDUCED 1	60.733	1.99E-75
Broccoli	AT5G48850	SDI1	Protein SULFUR DEFICIENCY-INDUCED 1	53.81	1.45E-67
Cabbage	AT5G48850	SDI1	Protein SULFUR DEFICIENCY-INDUCED 1	92.484	0
Cabbage	AT5G48850	SDI1	Protein SULFUR DEFICIENCY-INDUCED 1	91.83	0
Cabbage	AT5G48850	SDI1	Protein SULFUR DEFICIENCY-INDUCED 1	91.438	0
Cabbage	AT5G48850	SDI1	Protein SULFUR DEFICIENCY-INDUCED 1	59.516	1.60E-107
Cabbage	AT5G48850	SDI1	Protein SULFUR DEFICIENCY-INDUCED 1	69.124	9.86E-104
Cabbage	AT5G48850	SDI1	Protein SULFUR DEFICIENCY-INDUCED 1	66.332	3.91E-92
Cabbage	AT5G48850	SDI1	Protein SULFUR DEFICIENCY-INDUCED 1	63.731	1.21E-85
Cabbage	AT5G48850	SDI1	Protein SULFUR DEFICIENCY-INDUCED 1	59	2.95E-80
Cabbage	AT5G48850	SDI1	Protein SULFUR DEFICIENCY-INDUCED 1	57.426	3.53E-77

GO ID	Ontology	GO Term	Description
GO:0005515	MF	protein binding	Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO:0005634	CC	nucleus	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some
GO:0006792	BP	regulation of sulfur utilization	Any process that modulates the frequency, rate or extent of sulfur utilization.
GO:0010438	BP	cellular response to sulfur starvation	Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of sulfur.
GO:0010439	BP	regulation of glucosinolate biosynthetic process	Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of glucosinolates, substituted thioglucosides found in rapeseed products and related cruciferae.
GO:0090568	CC	nuclear transcriptional repressor complex	A protein complex, located in the nucleus, that possesses activity that prevents or downregulates transcription.

Pubmed ID	Authors	Year	Title	Journal	Description
27730214	Aarabi, F., Kusajima, M., Tohge, T., Konishi, T., Gigolashvili, T., Takamune, M., Sasazaki, Y., Watanabe, M., Nakashita, H., Fernie, A.R., Saito, K., Takahashi, H., Hubberten, H.-M., Hoefgen, R. & Maruyama-Nakashita, A.	2016	Sulfur deficiency-induced repressor proteins optimize glucosinolate biosynthesis in plants	Science Advances