Sulfur Containing Compound Database
| Gene name | RPS27AC |
| AGI ID | AT3G62250 |
| Gene length | 157 |
| Uniprot ID | P59233 |
| Protein Name | Ubiquitin-40S ribosomal protein S27a-3 |
| Synonym | UBQ5 |
| EC number | N/A |
| Entrez Gene | 825398 |
| Refseq mrna | NM_116090 |
| Refseq protein | NP_191784 |
| Function | MKK9, an MKK, is an upstream activator of the MPKs MPK3 and MPK6 both in vitro and in planta. Expression of active MKK9 protein in transgenic plants induces the synthesis of ethylene and camalexin through the activation of the endogenous MPK3 and MPK6 kinases. MKK9-MPK3/MPK6 cascade participates in the regulation of the biosynthesis of ethylene and camalexin and may be an important axis in the stress responses of Arabidopsis (Xu et al. 2008). |
| Group | Camalexin biosynthesis |
| Reference | Xu et al. (2008) |
| Organism | AGI ID | Gene Name | Protein Name | Identity | E-Value | Description |
|---|---|---|---|---|---|---|
|
Papaya |
RPS27AC |
Ubiquitin-40S ribosomal protein S27a-3 |
94.156 |
8.31E-86 |
||
|
Papaya |
RPS27AC |
Ubiquitin-40S ribosomal protein S27a-3 |
94.156 |
1.08E-85 |
||
|
Broccoli |
RPS27AC |
Ubiquitin-40S ribosomal protein S27a-3 |
96.178 |
3.38E-89 |
||
|
Cabbage |
RPS27AC |
Ubiquitin-40S ribosomal protein S27a-3 |
98.726 |
2.17E-92 |
||
|
Cabbage |
RPS27AC |
Ubiquitin-40S ribosomal protein S27a-3 |
98.726 |
2.17E-92 |
||
|
Cabbage |
RPS27AC |
Ubiquitin-40S ribosomal protein S27a-3 |
98.726 |
2.17E-92 |
||
|
Cabbage |
RPS27AC |
Ubiquitin-40S ribosomal protein S27a-3 |
98.726 |
1.01E-91 |
||
|
Cabbage |
RPS27AC |
Ubiquitin-40S ribosomal protein S27a-3 |
92.949 |
1.42E-84 |
||
|
Cabbage |
RPS27AC |
Ubiquitin-40S ribosomal protein S27a-3 |
92.308 |
6.88E-84 |
| GO ID | Ontology | GO Term | Description |
|---|---|---|---|
|
MF |
mRNA binding |
Interacting selectively and non-covalently with messenger RNA (mRNA), an intermediate molecule between DNA and protein. mRNA includes UTR and coding sequences, but does not contain introns. |
|
|
CC |
nucleus |
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some |
|
|
CC |
Golgi apparatus |
A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membrane |
|
|
BP |
translation |
The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a |
|
|
CC |
cytosolic small ribosomal subunit |
The small subunit of a ribosome located in the cytosol. |
|
|
BP |
protein ubiquitination involved in ubiquitin-dependent protein catabolic process |
The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin group, or multiple ubiquitin groups, to the protein. |
|
|
MF |
metal ion binding |
Interacting selectively and non-covalently with any metal ion. |