Sulfur Containing Compound Database
Gene name | MED5 |
AGI ID | AT3G23590 |
Gene length | 1309 |
Uniprot ID | Q9LUG9 |
Protein Name | Mediator Subunit 5 |
Synonym | MED33A |
EC number | N/A |
Entrez Gene | 821938 |
Refseq mrna | NM_113262.4 |
Refseq protein | NP_189001.1 |
Function | Mediator Subunit 5 (MED5) involves in the crosstalk between phenylpropanoid and GSL biosynthesis. Expressly, the accumulation of GSL derivatives (aldoximes) would limit phenylpropanoid biosynthesis that requires MED5 |
Group | GSL transcription factor |
Reference | Kim et al. (2020) |
Organism | AGI ID | Gene Name | Protein Name | Identity | E-Value | Description |
---|---|---|---|---|---|---|
Papaya |
MED5 |
Mediator Subunit 5 |
41.297 |
0 |
||
Papaya |
MED5 |
Mediator Subunit 5 |
67.338 |
3.27E-180 |
||
Papaya |
MED5 |
Mediator Subunit 5 |
73.138 |
8.60E-146 |
||
Papaya |
MED5 |
Mediator Subunit 5 |
60.544 |
1.78E-103 |
||
Papaya |
MED5 |
Mediator Subunit 5 |
52.557 |
5.99E-97 |
||
Cabbage |
MED5 |
Mediator Subunit 5 |
89.381 |
0.00E+00 |
||
Cabbage |
MED5 |
Mediator Subunit 5 |
89.313 |
0.00E+00 |
||
Cabbage |
MED5 |
Mediator Subunit 5 |
83.316 |
0.00E+00 |
||
Cabbage |
MED5 |
Mediator Subunit 5 |
53.904 |
0.00E+00 |
||
Broccoli |
MED5 |
Mediator Subunit 5 |
91.137 |
0 |
||
Broccoli |
MED5 |
Mediator Subunit 5 |
69.492 |
1.41E-53 |
||
Broccoli |
MED5 |
Mediator Subunit 5 |
86.869 |
7.12E-95 |
GO ID | Ontology | GO Term | Description |
---|---|---|---|
MF |
molecular_function_unknown |
A molecular process that can be carried out by the action of a single macromolecular machine, usually via direct physical interactions with other molecular entities. Function in this sense denotes an action, or activity, that a gene product (or a complex) |
|
BP |
cell adhesion |
The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules. |
|
BP |
trichome morphogenesis |
The process in which the structures of a hair cell (trichome) cell are generated and organized |
|
CC |
mediator complex |
A protein complex that interacts with the carboxy-terminal domain of the largest subunit of RNA polymerase II and plays an active role in transducing the signal from a transcription factor to the transcriptional machinery. |
|
BP |
actin nucleation |
The initial step in the formation of an actin filament, in which actin monomers combine to form a new filament |
|
BP |
root hair cell differentiation |
The process in which a relatively unspecialized cell acquires specialized features of a root hair cell. |
|
BP |
cell wall organization |
A process that results in the assembly, arrangement of constituent parts, or disassembly of the cell wall, the rigid or semi-rigid envelope lying outside the cell membrane of plant, fungal and most prokaryotic cells, maintaining their shape and protecting |
|
BP |
regulation of phenylpropanoid metabolic process |
Any process that modulates the frequency, rate or extent of phenylpropanoid metabolic process |
Pubmed ID | Authors | Year | Title | Journal | Description |
---|---|---|---|---|---|
Kim, J. I.; Zhang, X.; Pascuzzi, P. E.; Liu, C. J.; Chapple, C. |
2020 |
Glucosinolate and Phenylpropanoid Biosynthesis Are Linked by Proteasome-Dependent Degradation of PAL |
New Phytol |