SuCComBase

Sulfur Containing Compound Database

SCC Gene Description

Gene name COI1
AGI ID AT2G39940
Gene length 592
Uniprot ID O04197
Protein Name Coronatine-insensitive protein 1
Synonym FBL2
EC number N/A
Entrez Gene 818581
Refseq mrna NM_129552
Refseq protein NP_565919
Function FMO convert 4-methylthioalkyl to 4-meth-ylsulfinylalkyl GSLs and is pathogen-induced independent of COI1. Simultaneous induction of methionine, tryptophan,camalexin, and GSL biosynthetic genes provided evidence for coordinated regulation of primary and secondary metabolism (Stotz et al. 2011)
Group GSL side chain modification / Camalexin biosynthesis
Reference Stotz et al. (2011)
Organism AGI ID Gene Name Protein Name Identity E-Value Description

Papaya

AT2G39940

COI1

Coronatine-insensitive protein 1

75

0

Broccoli

AT2G39940

COI1

Coronatine-insensitive protein 1

89.322

0

Broccoli

AT2G39940

COI1

Coronatine-insensitive protein 1

77.612

0

Broccoli

AT2G39940

COI1

Coronatine-insensitive protein 1

76.656

0

Cabbage

AT2G39940

COI1

Coronatine-insensitive protein 1

89.661

0

Cabbage

AT2G39940

COI1

Coronatine-insensitive protein 1

89.351

0

Cabbage

AT2G39940

COI1

Coronatine-insensitive protein 1

78.42

0

GO ID Ontology GO Term Description

GO:0004842

MF

ubiquitin-protein transferase activity

Catalysis of the transfer of ubiquitin from one protein to another via the reaction X-Ub + Y --> Y-Ub + X, where both X-Ub and Y-Ub are covalent linkages

GO:0005515

MF

protein binding

Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).

GO:0005634

CC

nucleus

A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some

GO:0006511

BP

ubiquitin-dependent protein catabolic process

The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin group, or multiple ubiquitin groups, to the protein.

GO:0006952

BP

defense response

Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack.

GO:0009611

BP

response to wounding

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to the organism.

GO:0009625

BP

response to insect

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from an insect.

GO:0009641

BP

shade avoidance

Shade avoidance is a set of responses that plants display when they are subjected to the shade of another plant. It often includes elongation, altered flowering time, increased apical dominance and altered partitioning of resources. Plants are able to dis

GO:0009753

BP

response to jasmonic acid

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a jasmonic acid stimulus.

GO:0009861

BP

jasmonic acid and ethylene-dependent systemic resistance

The jasmonic acid and ethylene (ethene) dependent process that confers broad spectrum systemic resistance to disease in response to wounding or a pathogen.

GO:0009867

BP

jasmonic acid mediated signaling pathway

A series of molecular signals mediated by jasmonic acid.

GO:0009901

BP

anther dehiscence

The dehiscence of an anther to release the pollen grains contained within it.

GO:0009909

BP

regulation of flower development

Any process that modulates the frequency, rate or extent of flower development.

GO:0010118

BP

stomatal movement

The process of opening or closing of stomata, which is directly related to the stomatal conductance (measuring rate of passage of either water vapor or carbon dioxide (CO2) through stomata).

GO:0010218

BP

response to far red light

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of far red light stimulus. Far red light is electromagnetic radiation of wavelength

GO:0016567

BP

protein ubiquitination

The process in which one or more ubiquitin groups are added to a protein.

GO:0019005

CC

SCF ubiquitin ligase complex

A ubiquitin ligase complex in which a cullin from the Cul1 subfamily and a RING domain protein form the catalytic core; substrate specificity is conferred by a Skp1 adaptor and an F-box protein. SCF complexes are involved in targeting proteins for degrada

GO:0031146

BP

SCF-dependent proteasomal ubiquitin-dependent protein catabolic process

The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, with ubiquitin-protein ligation catalyzed by an SCF (Skp1/Cul1/F-box protein) com

GO:0031348

BP

negative regulation of defense response

Any process that stops, prevents, or reduces the frequency, rate or extent of a defense response.

GO:0042742

BP

defense response to bacterium

Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism.

GO:0048364

BP

root development

The process whose specific outcome is the progression of the root over time, from its formation to the mature structure. The root is the water- and mineral-absorbing part of a plant which is usually underground, does not bear leaves, tends to grow downwar

GO:0048443

BP

stamen development

The process whose specific outcome is the progression of the stamen over time, from its formation to the mature structure.

GO:0050832

BP

defense response to fungus

Reactions triggered in response to the presence of a fungus that act to protect the cell or organism.

No references found.