Sulfur Containing Compound Database
| Gene name | ARF1 |
| AGI ID | AT1G59750 |
| Gene length | 665 |
| Uniprot ID | Q8L7G0 |
| Protein Name | auxin response factor 1 |
| Synonym | F23H11.7 |
| EC number | N/A |
| Entrez Gene | 842268 |
| Refseq mrna | NM_104668 |
| Refseq protein | NP_176184 |
| Function | ARF1 and ARF9 negatively regulate glucosinolate accumulation, and that ARF9 positively regulates camalexin accumulation. The action of miR393 on auxin signalling triggers two complementary responses. First, it prevents suppression of SA levels by auxin. Second, it stabilizes ARF1 and ARF9 in inactive complexes (Robert-Seilaniantz et al. 2011) |
| Group | Camalexin biosynthesis |
| Reference | Robert-Seilaniantz et al. (2011) |
| Organism | AGI ID | Gene Name | Protein Name | Identity | E-Value | Description |
|---|---|---|---|---|---|---|
|
Papaya |
ARF1 |
auxin response factor 1 |
70.968 |
1.02E-167 |
||
|
Papaya |
ARF1 |
auxin response factor 1 |
69.468 |
9.99E-167 |
||
|
Papaya |
ARF1 |
auxin response factor 1 |
56.941 |
6.42E-124 |
||
|
Papaya |
ARF1 |
auxin response factor 1 |
70.27 |
1.03E-113 |
||
|
Papaya |
ARF1 |
auxin response factor 1 |
86.813 |
3.16E-108 |
||
|
Papaya |
ARF1 |
auxin response factor 1 |
49.857 |
3.54E-108 |
||
|
Papaya |
ARF1 |
auxin response factor 1 |
49.419 |
6.42E-108 |
||
|
Papaya |
ARF1 |
auxin response factor 1 |
52.941 |
2.83E-107 |
||
|
Papaya |
ARF1 |
auxin response factor 1 |
54.882 |
6.29E-102 |
||
|
Papaya |
ARF1 |
auxin response factor 1 |
57.979 |
7.36E-62 |
||
|
Papaya |
ARF1 |
auxin response factor 1 |
55.026 |
9.96E-62 |
||
|
Papaya |
ARF1 |
auxin response factor 1 |
54.093 |
5.17E-59 |
||
|
Papaya |
ARF1 |
auxin response factor 1 |
55.952 |
1.40E-54 |
||
|
Papaya |
ARF1 |
auxin response factor 1 |
49.761 |
8.30E-54 |
||
|
Papaya |
ARF1 |
auxin response factor 1 |
45.413 |
3.73E-51 |
||
|
Broccoli |
ARF1 |
auxin response factor 1 |
47.082 |
5.80E-130 |
||
|
Broccoli |
ARF1 |
auxin response factor 1 |
50.27 |
3.48E-108 |
||
|
Broccoli |
ARF1 |
auxin response factor 1 |
52.367 |
1.64E-107 |
||
|
Broccoli |
ARF1 |
auxin response factor 1 |
53.488 |
1.89E-107 |
||
|
Broccoli |
ARF1 |
auxin response factor 1 |
52.071 |
6.03E-107 |
||
|
Broccoli |
ARF1 |
auxin response factor 1 |
52.047 |
1.98E-103 |
||
|
Broccoli |
ARF1 |
auxin response factor 1 |
51.495 |
1.45E-92 |
||
|
Broccoli |
ARF1 |
auxin response factor 1 |
44.379 |
6.17E-88 |
||
|
Broccoli |
ARF1 |
auxin response factor 1 |
45.029 |
1.39E-87 |
||
|
Broccoli |
ARF1 |
auxin response factor 1 |
48.693 |
4.06E-87 |
||
|
Broccoli |
ARF1 |
auxin response factor 1 |
51.171 |
1.57E-84 |
||
|
Broccoli |
ARF1 |
auxin response factor 1 |
44.412 |
1.91E-83 |
||
|
Broccoli |
ARF1 |
auxin response factor 1 |
46.026 |
1.33E-81 |
||
|
Broccoli |
ARF1 |
auxin response factor 1 |
44.012 |
1.94E-77 |
||
|
Broccoli |
ARF1 |
auxin response factor 1 |
42.815 |
3.40E-75 |
||
|
Broccoli |
ARF1 |
auxin response factor 1 |
42.745 |
1.92E-56 |
||
|
Cabbage |
ARF1 |
auxin response factor 1 |
93.994 |
0 |
||
|
Cabbage |
ARF1 |
auxin response factor 1 |
93.994 |
0 |
||
|
Cabbage |
ARF1 |
auxin response factor 1 |
93.844 |
0 |
||
|
Cabbage |
ARF1 |
auxin response factor 1 |
93.844 |
0 |
||
|
Cabbage |
ARF1 |
auxin response factor 1 |
93.844 |
0 |
||
|
Cabbage |
ARF1 |
auxin response factor 1 |
51.204 |
0 |
||
|
Cabbage |
ARF1 |
auxin response factor 1 |
50.318 |
0 |
||
|
Cabbage |
ARF1 |
auxin response factor 1 |
50.156 |
5.25E-179 |
||
|
Cabbage |
ARF1 |
auxin response factor 1 |
72.434 |
1.37E-166 |
||
|
Cabbage |
ARF1 |
auxin response factor 1 |
71.848 |
1.01E-164 |
||
|
Cabbage |
ARF1 |
auxin response factor 1 |
72.434 |
3.48E-158 |
||
|
Cabbage |
ARF1 |
auxin response factor 1 |
65.588 |
1.57E-153 |
||
|
Cabbage |
ARF1 |
auxin response factor 1 |
65.988 |
5.64E-151 |
||
|
Cabbage |
ARF1 |
auxin response factor 1 |
55.102 |
3.51E-115 |
||
|
Cabbage |
ARF1 |
auxin response factor 1 |
54.519 |
8.79E-115 |
||
|
Cabbage |
ARF1 |
auxin response factor 1 |
54.519 |
8.79E-115 |
||
|
Cabbage |
ARF1 |
auxin response factor 1 |
53.134 |
6.04E-110 |
||
|
Cabbage |
ARF1 |
auxin response factor 1 |
53.274 |
1.40E-109 |
||
|
Cabbage |
ARF1 |
auxin response factor 1 |
53.274 |
1.40E-109 |
||
|
Cabbage |
ARF1 |
auxin response factor 1 |
50.287 |
1.64E-109 |
||
|
Cabbage |
ARF1 |
auxin response factor 1 |
53.353 |
4.55E-107 |
||
|
Cabbage |
ARF1 |
auxin response factor 1 |
52.395 |
1.04E-106 |
||
|
Cabbage |
ARF1 |
auxin response factor 1 |
49.704 |
3.98E-105 |
||
|
Cabbage |
ARF1 |
auxin response factor 1 |
49.419 |
1.21E-104 |
||
|
Cabbage |
ARF1 |
auxin response factor 1 |
52.663 |
1.44E-103 |
||
|
Cabbage |
ARF1 |
auxin response factor 1 |
52.047 |
3.53E-103 |
||
|
Cabbage |
ARF1 |
auxin response factor 1 |
52.199 |
4.69E-103 |
||
|
Cabbage |
ARF1 |
auxin response factor 1 |
48 |
9.87E-99 |
||
|
Cabbage |
ARF1 |
auxin response factor 1 |
47.11 |
4.14E-95 |
||
|
Cabbage |
ARF1 |
auxin response factor 1 |
47.214 |
2.42E-91 |
||
|
Cabbage |
ARF1 |
auxin response factor 1 |
51.505 |
6.10E-85 |
||
|
Cabbage |
ARF1 |
auxin response factor 1 |
58.929 |
6.34E-73 |
||
|
Cabbage |
ARF1 |
auxin response factor 1 |
58.511 |
5.39E-66 |
||
|
Cabbage |
ARF1 |
auxin response factor 1 |
47.005 |
7.33E-52 |
| GO ID | Ontology | GO Term | Description |
|---|---|---|---|
|
MF |
DNA binding |
Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). |
|
|
MF |
transcription factor activity, sequence-specific DNA binding |
A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a gene in order to modulate transcription. Regulatory regions include promoter |
|
|
MF |
protein binding |
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
|
|
CC |
nucleus |
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some |
|
|
BP |
transcription, DNA-templated |
The cellular synthesis of RNA on a template of DNA. |
|
|
BP |
regulation of transcription, DNA-templated |
Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. |
|
|
BP |
response to auxin |
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hormone stimulus. |
|
|
BP |
auxin-activated signaling pathway |
A series of molecular signals generated by the binding of the plant hormone auxin to a receptor, and ending with modulation of a downstream cellular process, e.g. transcription. |
|
|
BP |
leaf senescence |
The process that occurs in a leaf near the end of its active life that is associated with the dismantling of cell components and membranes, loss of functional chloroplasts, and an overall decline in metabolism. |
|
|
MF |
identical protein binding |
Interacting selectively and non-covalently with an identical protein or proteins. |
|
|
BP |
negative regulation of transcription, DNA-templated |
Any process that stops, prevents, or reduces the frequency, rate or extent of cellular DNA-templated transcription. |