Sulfur Containing Compound Database
Gene name | OBP2 |
AGI ID | AT1G07640 |
Gene length | 331 |
Uniprot ID | Q8L9V6 |
Protein Name | Dof zinc finger protein DOF1.1 |
Synonym | DOF1.1 |
EC number | N/A |
Entrez Gene | 837277 |
Refseq mrna | NM_180607 |
Refseq protein | NP_850938 |
Function | OBP2 is expressed in the vasculature of all Arabidopsis organs; including leaves; roots; flower stalks and petals. OBP2 expression is induced in response to a generalist herbivore; Spodoptera littoralis and by treatment with the plant signalling molecule methyl jasmonate both of which also trigger indolic GSL accumulation (Skirycz et al. 2006) |
Group | GSL transcription factor |
Reference | Skirycz et al. (2006 ) |
Organism | AGI ID | Gene Name | Protein Name | Identity | E-Value | Description |
---|---|---|---|---|---|---|
Cabbage |
OBP2 |
Dof zinc finger protein DOF1.1 |
72 |
1.00E-113 |
||
Broccoli |
OBP2 |
Dof zinc finger protein DOF1.1 |
73 |
3.00E-113 |
||
Cabbage |
OBP2 |
Dof zinc finger protein DOF1.1 |
72 |
1.00E-112 |
||
Broccoli |
OBP2 |
Dof zinc finger protein DOF1.1 |
74 |
2.00E-107 |
||
Broccoli |
OBP2 |
Dof zinc finger protein DOF1.1 |
66 |
4.00E-90 |
GO ID | Ontology | GO Term | Description |
---|---|---|---|
BP |
regionalization |
The pattern specification process that results in the subdivision of an axis or axes in space to define an area or volume in which specific patterns of cell differentiation will take place or in which cells interpret a specific environment. |
|
MF |
DNA binding |
Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). |
|
MF |
transcription factor activity, sequence-specific DNA binding |
A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a gene in order to modulate transcription. Regulatory regions include promoter |
|
CC |
nucleus |
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some |
|
BP |
transcription, DNA-templated |
The cellular synthesis of RNA on a template of DNA. |
|
BP |
regulation of transcription, DNA-templated |
Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. |
|
BP |
response to wounding |
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to the organism. |
|
BP |
response to insect |
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from an insect. |
|
BP |
response to jasmonic acid |
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a jasmonic acid stimulus. |
|
BP |
regulation of glucosinolate biosynthetic process |
Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of glucosinolates, substituted thioglucosides found in rapeseed products and related cruciferae. |
|
MF |
transcription regulatory region DNA binding |
Interacting selectively and non-covalently with a DNA region that regulates the transcription of a region of DNA, which may be a gene, cistron, or operon. Binding may occur as a sequence specific interaction or as an interaction observed only once a facto |
|
MF |
metal ion binding |
Interacting selectively and non-covalently with any metal ion. |
Pubmed ID | Authors | Year | Title | Journal | Description |
---|---|---|---|---|---|
Skirycz, A., Reichelt, M., Burow, M., Birkemeyer, C., Rolcik, J., Kopka, J., Zanor, M.I., Gershenzon, J., Strnad, M., Szopa, J., Mueller-Roeber, B. & Witt, I. |
2006 |
DOF transcription factor AtDof1.1 (OBP2) is part of a regulatory network controlling glucosinolate biosynthesis in Arabidopsis |
Plant Journal |