SuCComBase

Sulfur Containing Compound Database

SCC Gene Description

Gene name OBP2
AGI ID AT1G07640
Gene length 331
Uniprot ID Q8L9V6
Protein Name Dof zinc finger protein DOF1.1
Synonym DOF1.1
EC number N/A
Entrez Gene 837277
Refseq mrna NM_180607
Refseq protein NP_850938
Function OBP2 is expressed in the vasculature of all Arabidopsis organs; including leaves; roots; flower stalks and petals. OBP2 expression is induced in response to a generalist herbivore; Spodoptera littoralis and by treatment with the plant signalling molecule methyl jasmonate both of which also trigger indolic GSL accumulation (Skirycz et al. 2006)
Group GSL transcription factor
Reference Skirycz et al. (2006 )
Organism AGI ID Gene Name Protein Name Identity E-Value Description

Cabbage

AT1G07640

OBP2

Dof zinc finger protein DOF1.1

72

1.00E-113

Broccoli

AT1G07640

OBP2

Dof zinc finger protein DOF1.1

73

3.00E-113

Cabbage

AT1G07640

OBP2

Dof zinc finger protein DOF1.1

72

1.00E-112

Broccoli

AT1G07640

OBP2

Dof zinc finger protein DOF1.1

74

2.00E-107

Broccoli

AT1G07640

OBP2

Dof zinc finger protein DOF1.1

66

4.00E-90

GO ID Ontology GO Term Description

GO:0003002

BP

regionalization

The pattern specification process that results in the subdivision of an axis or axes in space to define an area or volume in which specific patterns of cell differentiation will take place or in which cells interpret a specific environment.

GO:0003677

MF

DNA binding

Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).

GO:0003700

MF

transcription factor activity, sequence-specific DNA binding

A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a gene in order to modulate transcription. Regulatory regions include promoter

GO:0005634

CC

nucleus

A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some

GO:0006351

BP

transcription, DNA-templated

The cellular synthesis of RNA on a template of DNA.

GO:0006355

BP

regulation of transcription, DNA-templated

Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.

GO:0009611

BP

response to wounding

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to the organism.

GO:0009625

BP

response to insect

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from an insect.

GO:0009753

BP

response to jasmonic acid

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a jasmonic acid stimulus.

GO:0010439

BP

regulation of glucosinolate biosynthetic process

Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of glucosinolates, substituted thioglucosides found in rapeseed products and related cruciferae.

GO:0044212

MF

transcription regulatory region DNA binding

Interacting selectively and non-covalently with a DNA region that regulates the transcription of a region of DNA, which may be a gene, cistron, or operon. Binding may occur as a sequence specific interaction or as an interaction observed only once a facto

GO:0046872

MF

metal ion binding

Interacting selectively and non-covalently with any metal ion.

Pubmed ID Authors Year Title Journal Description

16740150

Skirycz, A., Reichelt, M., Burow, M., Birkemeyer, C., Rolcik, J., Kopka, J., Zanor, M.I., Gershenzon, J., Strnad, M., Szopa, J., Mueller-Roeber, B. & Witt, I.

2006

DOF transcription factor AtDof1.1 (OBP2) is part of a regulatory network controlling glucosinolate biosynthesis in Arabidopsis

Plant Journal