SuCComBase

SCC Gene Description

Gene name	SDI2
AGI ID	AT1G04770
Gene length	303
Uniprot ID	Q8L730
Protein Name	Protein SULFUR DEFICIENCY-INDUCED 2
Synonym	F13M7.24
EC number	N/A
Entrez Gene	839418
Refseq mrna	NM_100355.4.
Refseq protein	NP_171969.2
Function	Sulfur deficiency induced 1 (SD1) and SD2 are –S marker genes sulfur deficiency that act as major repressors controlling GSL biosynthesis in Arabidopsis under –S condition. SDI1 and SDI2 expression negatively correlated with GSL biosynthesis in both transcript and metabolite levels. Principal components analysis of transcriptome data indicated that SDI1 regulates aliphatic GSL biosynthesis as part of –S response. SDI1 was localized to the nucleus and interacted with MYB28 a major transcription factor that promotes aliphatic GSL biosynthesis in both yeast and plant cells (Aarabi et al. 2016)
Group	GSL core structure synthesis
Reference	Aarabi et al. (2016)

Organism	AGI ID	Gene Name	Protein Name	Identity	E-Value
Papaya	AT1G04770	SDI2	Protein SULFUR DEFICIENCY-INDUCED 2	68.667	1.82E-143
Papaya	AT1G04770	SDI2	Protein SULFUR DEFICIENCY-INDUCED 2	65.845	9.02E-123
Papaya	AT1G04770	SDI2	Protein SULFUR DEFICIENCY-INDUCED 2	60.435	1.26E-89
Papaya	AT1G04770	SDI2	Protein SULFUR DEFICIENCY-INDUCED 2	62.085	9.41E-80
Broccoli	AT1G04770	SDI2	Protein SULFUR DEFICIENCY-INDUCED 2	87.5	5.15E-174
Broccoli	AT1G04770	SDI2	Protein SULFUR DEFICIENCY-INDUCED 2	83.624	1.66E-152
Broccoli	AT1G04770	SDI2	Protein SULFUR DEFICIENCY-INDUCED 2	59.507	1.60E-114
Broccoli	AT1G04770	SDI2	Protein SULFUR DEFICIENCY-INDUCED 2	58.333	2.21E-112
Broccoli	AT1G04770	SDI2	Protein SULFUR DEFICIENCY-INDUCED 2	57.343	1.53E-106
Broccoli	AT1G04770	SDI2	Protein SULFUR DEFICIENCY-INDUCED 2	61.78	6.19E-76
Broccoli	AT1G04770	SDI2	Protein SULFUR DEFICIENCY-INDUCED 2	50.199	7.93E-75
Broccoli	AT1G04770	SDI2	Protein SULFUR DEFICIENCY-INDUCED 2	56.545	2.27E-64
Cabbage	AT1G04770	SDI2	Protein SULFUR DEFICIENCY-INDUCED 2	89.037	2.10E-176
Cabbage	AT1G04770	SDI2	Protein SULFUR DEFICIENCY-INDUCED 2	85.714	1.74E-158
Cabbage	AT1G04770	SDI2	Protein SULFUR DEFICIENCY-INDUCED 2	60.211	1.48E-116
Cabbage	AT1G04770	SDI2	Protein SULFUR DEFICIENCY-INDUCED 2	60.14	3.60E-116
Cabbage	AT1G04770	SDI2	Protein SULFUR DEFICIENCY-INDUCED 2	59.507	2.48E-115
Cabbage	AT1G04770	SDI2	Protein SULFUR DEFICIENCY-INDUCED 2	61.304	2.77E-90
Cabbage	AT1G04770	SDI2	Protein SULFUR DEFICIENCY-INDUCED 2	60.829	5.87E-85
Cabbage	AT1G04770	SDI2	Protein SULFUR DEFICIENCY-INDUCED 2	50.199	3.21E-75
Cabbage	AT1G04770	SDI2	Protein SULFUR DEFICIENCY-INDUCED 2	50.439	6.46E-70

GO ID	Ontology	GO Term	Description
GO:0009658	BP	chloroplast organization	A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the chloroplast.
GO:0010439	BP	regulation of glucosinolate biosynthetic process	Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of glucosinolates, substituted thioglucosides found in rapeseed products and related cruciferae.

Pubmed ID	Authors	Year	Title	Journal	Description
27730214	Aarabi, F., Kusajima, M., Tohge, T., Konishi, T., Gigolashvili, T., Takamune, M., Sasazaki, Y., Watanabe, M., Nakashita, H., Fernie, A.R., Saito, K., Takahashi, H., Hubberten, H.-M., Hoefgen, R. & Maruyama-Nakashita, A.	2016	Sulfur deficiency-induced repressor proteins optimize glucosinolate biosynthesis in plants	Science Advances