SuCComBase

Sulfur Containing Compound Database

Potential SCC Gene Description

Gene name NADP-ME2
AGI ID AT5G11670
Gene length 588
Uniprot ID Q9LYG3
Protein Name NADP-dependent malic enzyme 2
Synonym T22P22.60
EC number 1.1.1.40
Entrez Gene 831039
Refseq mrna NM_121205
Refseq protein NP_196728
Database GeneMANIA
GeneMANIA
GeneMANIA
GeneMANIA
GeneMANIA
GeneMANIA
GeneMANIA
GeneMANIA
GO ID Ontology GO Term Description

GO:0004470

MF

malic enzyme activity

Catalysis of the oxidative decarboxylation of malate with the concomitant production of pyruvate.

GO:0004471

MF

malate dehydrogenase (decarboxylating) (NAD+) activity

Catalysis of the reaction: (S)-malate + NAD+ = pyruvate + CO2 + NADH + H+.

GO:0004473

MF

malate dehydrogenase (decarboxylating) (NADP+) activity

Catalysis of the reaction: (S)-malate + NADP+ = pyruvate + CO2 + NADPH + H+.

GO:0005618

CC

cell wall

The rigid or semi-rigid envelope lying outside the cell membrane of plant, fungal, most prokaryotic cells and some protozoan parasites, maintaining their shape and protecting them from osmotic lysis. In plants it is made of cellulose and, often, lignin; i

GO:0005774

CC

vacuolar membrane

The lipid bilayer surrounding the vacuole and separating its contents from the cytoplasm of the cell.

GO:0005829

CC

cytosol

The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.

GO:0005886

CC

plasma membrane

The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.

GO:0006090

BP

pyruvate metabolic process

The chemical reactions and pathways involving pyruvate, 2-oxopropanoate.

GO:0006108

BP

malate metabolic process

The chemical reactions and pathways involving malate, the anion of hydroxybutanedioic acid, a chiral hydroxydicarboxylic acid. The (+) enantiomer is an important intermediate in metabolism as a component of both the TCA cycle and the glyoxylate cycle.

GO:0008948

MF

oxaloacetate decarboxylase activity

Catalysis of the reaction: oxaloacetate = pyruvate + CO2.

GO:0009051

BP

pentose-phosphate shunt, oxidative branch

The branch of the pentose-phosphate shunt which involves the oxidation of glucose 6-P and produces ribulose 5-P, reduced NADP+ and carbon dioxide (CO2).

GO:0009506

CC

plasmodesma

A fine cytoplasmic channel, found in all higher plants, that connects the cytoplasm of one cell to that of an adjacent cell.

GO:0009507

CC

chloroplast

A chlorophyll-containing plastid with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma.

GO:0016020

CC

membrane

A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.

GO:0016652

MF

oxidoreductase activity, acting on NAD(P)H, NAD(P) as acceptor

Catalysis of an oxidation-reduction (redox) reaction in which NADH or NADPH acts as a hydrogen or electron donor and reduces NAD+ or NADP.

GO:0046686

BP

response to cadmium ion

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cadmium (Cd) ion stimulus.

GO:0046872

MF

metal ion binding

Interacting selectively and non-covalently with any metal ion.

GO:0048046

CC

apoplast

The cell membranes and intracellular regions in a plant are connected through plasmodesmata, and plants may be described as having two major compartments: the living symplast and the non-living apoplast. The apoplast is external to the plasma membrane and

GO:0051260

BP

protein homooligomerization

The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of identical component monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large prote

GO:0051287

MF

NAD binding

Interacting selectively and non-covalently with nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NAD+, or the reduced form, NADH.

GO:0055114

BP

oxidation-reduction process

A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.