SuCComBase

GO:0000413

BP

protein peptidyl-prolyl isomerization

The modification of a protein by cis-trans isomerization of a proline residue.

GO:0001932

BP

regulation of protein phosphorylation

Any process that modulates the frequency, rate or extent of addition of phosphate groups into an amino acid in a protein.

GO:0003755

MF

peptidyl-prolyl cis-trans isomerase activity

Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0).

GO:0005737

CC

cytoplasm

All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

GO:0005829

CC

cytosol

The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.

GO:0005886

CC

plasma membrane

The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.

GO:0006457

BP

protein folding

The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure.

GO:0007165

BP

signal transduction

The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or f

GO:0009416

BP

response to light stimulus

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a light stimulus, electromagnetic radiation of wavelengths classified as infrared

GO:0009585

BP

red, far-red light phototransduction

The sequence of reactions within a cell required to convert absorbed photons from red or far-red light into a molecular signal; the red, far-red light range is defined as having a wavelength within the range 660-730 nm.

GO:0009626

BP

plant-type hypersensitive response

The rapid, localized death of plant cells in response to invasion by a pathogen.

GO:0009704

BP

de-etiolation

The greening response of plants grown in the dark (etiolated) as a result of chloroplast biogenesis and the accumulation of chlorophyll.

GO:0009735

BP

response to cytokinin

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cytokinin stimulus.

GO:0009742

BP

brassinosteroid mediated signaling pathway

A series of molecular signals mediated by the detection of brassinosteroid.

GO:0009785

BP

blue light signaling pathway

The series of molecular signals initiated upon sensing of blue light by photoreceptor molecule, at a wavelength between 400nm and 470nm.

GO:0046686

BP

response to cadmium ion

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cadmium (Cd) ion stimulus.

GO:0048046

CC

apoplast

The cell membranes and intracellular regions in a plant are connected through plasmodesmata, and plants may be described as having two major compartments: the living symplast and the non-living apoplast. The apoplast is external to the plasma membrane and