SuCComBase

Sulfur Containing Compound Database

Potential SCC Gene Description

Gene name CCD1
AGI ID AT3G63520
Gene length 538
Uniprot ID O65572
Protein Name Carotenoid 9,10
Synonym NC1
EC number N/A
Entrez Gene 825527
Refseq mrna NM_116217.3
Refseq protein NP_191911.1
Database
GO ID Ontology GO Term Description

GO:0005737

CC

cytoplasm

All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

GO:0005773

CC

vacuole

A closed structure, found only in eukaryotic cells, that is completely surrounded by unit membrane and contains liquid material. Cells contain one or several vacuoles, that may have different functions from each other. Vacuoles have a diverse array of fun

GO:0005774

CC

vacuolar membrane

The lipid bilayer surrounding the vacuole and separating its contents from the cytoplasm of the cell.

GO:0005794

CC

Golgi apparatus

A compound membranous cytoplasmic organelle of eukaryotic cells, consisting of flattened, ribosome-free vesicles arranged in a more or less regular stack. The Golgi apparatus differs from the endoplasmic reticulum in often having slightly thicker membrane

GO:0005886

CC

plasma membrane

The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.

GO:0009414

BP

response to water deprivation

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a water deprivation stimulus, prolonged deprivation of water.

GO:0009506

CC

plasmodesma

A fine cytoplasmic channel, found in all higher plants, that connects the cytoplasm of one cell to that of an adjacent cell.

GO:0016118

BP

carotenoid catabolic process

The chemical reactions and pathways resulting in the breakdown of carotenoids, tetraterpenoid compounds in which two units of 4 isoprenoid residues joined head-to-tail are themselves joined tail-to-tail.

GO:0016121

BP

carotene catabolic process

The chemical reactions and pathways resulting in the breakdown of carotenes, hydrocarbon carotenoids.

GO:0016124

BP

xanthophyll catabolic process

The chemical reactions and pathways resulting in the breakdown of xanthophylls, oxygen-containing carotenoids.

GO:0045549

MF

9-cis-epoxycarotenoid dioxygenase activity

Catalysis of the reactions: a 9-cis-epoxycarotenoid + O2 = 2-cis,4-trans-xanthoxin + a 12'-apo-carotenal; 9-cis-violaxanthin + O2 = 2-cis,4-trans-xanthoxin + (3S,5R,6S)-5,6-epoxy-3-hydroxy-5,6-dihydro-12'-apo-beta-caroten-12'-al; and 9'-cis-neoxanthin + O

GO:0046872

MF

metal ion binding

Interacting selectively and non-covalently with any metal ion.

GO:0055114

BP

oxidation-reduction process

A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.