SuCComBase

Sulfur Containing Compound Database

Potential SCC Gene Description

Gene nameAT3G27400
AGI IDAT3G27400
Gene length412
Uniprot IDQ9LTZ0
Protein NamePutative pectate lyase 11
SynonymK1G2.11
EC number4.2.2.2
Entrez Gene822361
Refseq mrnaNM_113655
Refseq proteinNP_189376
Database GeneMANIA
GeneMANIA
GeneMANIA
GeneMANIA
GeneMANIA
GeneMANIA
GeneMANIA
GeneMANIA
GO IDOntologyGO TermDescription

GO:0005576

CC

extracellular region

A location, relative to cellular compartments and structures, occupied by a macromolecular machine when it carries out a molecular function. There are two ways in which the gene ontology describes locations of gene products: (1) relative to cellular struc

GO:0009624

BP

response to nematode

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a nematode.

GO:0030570

MF

pectate lyase activity

Catalysis of the reaction: a pectate = a pectate + a pectate oligosaccharide with 4-(4-deoxy-alpha-D-galact-4-enuronosyl)-D-galacturonate end. This reaction is the eliminative cleavage of pectate to give oligosaccharides with 4-deoxy-alpha-D-gluc-4-enuron

GO:0045490

BP

pectin catabolic process

The chemical reactions and pathways resulting in the breakdown of pectin, a polymer containing a backbone of alpha-1,4-linked D-galacturonic acid residues.

GO:0046872

MF

metal ion binding

Interacting selectively and non-covalently with any metal ion.