SuCComBase

Sulfur Containing Compound Database

Potential SCC Gene Description

Gene name PYK10
AGI ID AT3G09260
Gene length 524
Uniprot ID Q9SR37
Protein Name Beta-glucosidase 23
Synonym PSR3.1
EC number 3.2.1.21
Entrez Gene 820082
Refseq mrna NM_111760
Refseq protein NP_187537
Database GeneMANIA
ATTED
GeneMANIA
ATTED
GeneMANIA
ATTED
GeneMANIA
ATTED
GeneMANIA
ATTED
GeneMANIA
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GeneMANIA
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GeneMANIA
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GO ID Ontology GO Term Description

GO:0002020

MF

protease binding

Interacting selectively and non-covalently with any protease or peptidase.

GO:0004553

MF

hydrolase activity, hydrolyzing O-glycosyl compounds

Catalysis of the hydrolysis of any O-glycosyl bond.

GO:0005507

MF

copper ion binding

Interacting selectively and non-covalently with copper (Cu) ions.

GO:0005515

MF

protein binding

Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).

GO:0005634

CC

nucleus

A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some

GO:0005773

CC

vacuole

A closed structure, found only in eukaryotic cells, that is completely surrounded by unit membrane and contains liquid material. Cells contain one or several vacuoles, that may have different functions from each other. Vacuoles have a diverse array of fun

GO:0005777

CC

peroxisome

A small organelle enclosed by a single membrane, and found in most eukaryotic cells. Contains peroxidases and other enzymes involved in a variety of metabolic processes including free radical detoxification, lipid catabolism and biosynthesis, and hydrogen

GO:0005783

CC

endoplasmic reticulum

The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisterna

GO:0005788

CC

endoplasmic reticulum lumen

The volume enclosed by the membranes of the endoplasmic reticulum.

GO:0005829

CC

cytosol

The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.

GO:0005975

BP

carbohydrate metabolic process

The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.

GO:0006970

BP

response to osmotic stress

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating an increase or decrease in the concentration of solutes out

GO:0008422

MF

beta-glucosidase activity

Catalysis of the hydrolysis of terminal, non-reducing beta-D-glucose residues with release of beta-D-glucose.

GO:0009506

CC

plasmodesma

A fine cytoplasmic channel, found in all higher plants, that connects the cytoplasm of one cell to that of an adjacent cell.

GO:0009507

CC

chloroplast

A chlorophyll-containing plastid with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma.

GO:0009610

BP

response to symbiotic fungus

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a symbiotic fungus, a fungus living in close physical association

GO:0009651

BP

response to salt stress

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating an increase or decrease in the concentration of salt (parti

GO:0009735

BP

response to cytokinin

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cytokinin stimulus.

GO:0010168

CC

ER body

A novel compartment found in plant cells that is derived from the ER. The structures have a characteristic shape and size (10 mm long and 0.5 mm wide) and are surrounded with ribosomes. They have been found in Arabidopsis thaliana and related Brassicaceae

GO:0015928

MF

fucosidase activity

Catalysis of the hydrolysis of fucosyl compounds, substances containing a group derived from a cyclic form of fucose or a fucose derivative.

GO:0016020

CC

membrane

A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.

GO:0019137

MF

thioglucosidase activity

Catalysis of the reaction: a thioglucoside + H2O = a thiol + a sugar.

GO:0019760

BP

glucosinolate metabolic process

The chemical reactions and pathways involving glucosinolates, substituted thioglucosides found in rapeseed products and related cruciferae. They are metabolized to a variety of toxic products which are most likely the cause of hepatocytic necrosis in anim

GO:0019762

BP

glucosinolate catabolic process

The chemical reactions and pathways resulting in the breakdown of glucosinolates, substituted thioglucosides found in rapeseed products and related cruciferae.

GO:0031348

BP

negative regulation of defense response

Any process that stops, prevents, or reduces the frequency, rate or extent of a defense response.

GO:0042343

BP

indole glucosinolate metabolic process

The chemical reactions and pathways resulting in the formation of indole glucosinolates. Glucosinolates are sulfur-containing compounds that have a common structure linked to an R group derived from tryptophan; indoles are biologically active substances b

GO:0042344

BP

indole glucosinolate catabolic process

The chemical reactions and pathways resulting in the breakdown of indole glucosinolates, sulfur-containing compounds that have a common structure linked to an R group derived from tryptophan.

GO:0042803

MF

protein homodimerization activity

Interacting selectively and non-covalently with an identical protein to form a homodimer.

GO:0070417

BP

cellular response to cold

Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cold stimulus, a temperature stimulus below the optimal temperature for that organism.

GO:0080119

BP

ER body organization

A process that is carried out at the cellular level which results in the formation of ER (endoplasmic reticulum) body. ER body is a compartment found in plant cells that is derived from the ER. The structures have a characteristic shape and size (10 mm lo

GO:0102483

MF

scopolin beta-glucosidase activity

Catalysis of the reaction: H2O + scopolin <=> beta-D-glucose + scopoletin