Sulfur Containing Compound Database
Gene name | VAR2 |
AGI ID | AT2G30950 |
Gene length | 695 |
Uniprot ID | O80860 |
Protein Name | ATP-dependent zinc metalloprotease FTSH 2, chloroplastic |
Synonym | VAR2 |
EC number | N/A |
Entrez Gene | 817646 |
Refseq mrna | NM_001336310.1 |
Refseq protein | NP_001323510.1 |
Database |
GO ID | Ontology | GO Term | Description |
---|---|---|---|
MF |
ATP-dependent peptidase activity |
Catalysis of the reaction: ATP + H2O = ADP + phosphate, to drive the hydrolysis of peptide bonds. |
|
MF |
metalloendopeptidase activity |
Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal i |
|
MF |
ATP binding |
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. |
|
BP |
proteolysis |
The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds. |
|
BP |
multicellular organism development |
The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult). |
|
MF |
metallopeptidase activity |
Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions. |
|
MF |
zinc ion binding |
Interacting selectively and non-covalently with zinc (Zn) ions. |
|
CC |
chloroplast |
A chlorophyll-containing plastid with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma. |
|
CC |
chloroplast thylakoid |
Sac-like membranous structures (cisternae) in a chloroplast combined into stacks (grana) and present singly in the stroma (stroma thylakoids or frets) as interconnections between grana. An example of this component is found in Arabidopsis thaliana. |
|
CC |
chloroplast thylakoid membrane |
The pigmented membrane of a chloroplast thylakoid. An example of this component is found in Arabidopsis thaliana. |
|
CC |
thylakoid |
A membranous cellular structure that bears the photosynthetic pigments in plants, algae, and cyanobacteria. In cyanobacteria thylakoids are of various shapes and are attached to, or continuous with, the plasma membrane. In eukaryotes they are flattened, m |
|
BP |
response to cytokinin |
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cytokinin stimulus. |
|
CC |
chloroplast envelope |
The double lipid bilayer enclosing the chloroplast and separating its contents from the rest of the cytoplasm; includes the intermembrane space. |
|
BP |
thylakoid membrane organization |
A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the thylakoid membrane. |
|
BP |
photoinhibition |
The mechanism by which high light intensity inhibits photosynthesis through inactivation of the D1 protein of photosystem II. |
|
BP |
photosystem II repair |
Proteolysis of the damaged D1 protein and re-assembly of a new D1 subunit in the photosystem II following photoinhibition. |
|
BP |
PSII associated light-harvesting complex II catabolic process |
The chemical reactions and pathways resulting in the breakdown of one or more components of the light-harvesting complex of photosystem II. |
|
CC |
membrane |
A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
|
CC |
integral component of membrane |
The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
|
MF |
ATPase activity |
Catalysis of the reaction: ATP + H2O = ADP + phosphate + 2 H+. May or may not be coupled to another reaction. |
|
BP |
protein catabolic process |
The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds. |
|
CC |
thylakoid lumen |
The volume enclosed by a thylakoid membrane. |
|
MF |
metal ion binding |
Interacting selectively and non-covalently with any metal ion. |
|
BP |
photosystem I assembly |
The aggregation, arrangement and bonding together of a set of components to form a photosystem I complex on the thylakoid membrane. |
|
BP |
reactive oxygen species metabolic process |
The chemical reactions and pathways involving a reactive oxygen species, any molecules or ions formed by the incomplete one-electron reduction of oxygen. They contribute to the microbicidal activity of phagocytes, regulation of signal transduction and gen |