Sulfur Containing Compound Database
| Gene name | NIR1 |
| AGI ID | AT2G15620 |
| Gene length | 586 |
| Uniprot ID | Q39161 |
| Protein Name | Ferredoxin--nitrite reductase, chloroplastic |
| Synonym | NIR |
| EC number | 1.7.7.1 |
| Entrez Gene | 816055 |
| Refseq mrna | NM_127123 |
| Refseq protein | NP_179164 |
| Database |
GeneMANIA ATTED GeneMANIA ATTED GeneMANIA ATTED GeneMANIA ATTED GeneMANIA ATTED GeneMANIA ATTED GeneMANIA ATTED GeneMANIA ATTED |
| GO ID | Ontology | GO Term | Description |
|---|---|---|---|
|
CC |
mitochondrion |
A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration. |
|
|
CC |
chloroplast |
A chlorophyll-containing plastid with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma. |
|
|
CC |
chloroplast stroma |
The space enclosed by the double membrane of a chloroplast but excluding the thylakoid space. It contains DNA, ribosomes and some temporary products of photosynthesis. |
|
|
BP |
response to nitrate |
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nitrate stimulus. |
|
|
CC |
membrane |
A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
|
|
MF |
heme binding |
Interacting selectively and non-covalently with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring. |
|
|
BP |
nitrate assimilation |
The nitrogen metabolic process that encompasses the uptake of nitrate from the environment and reduction to ammonia, and results in the incorporation of nitrogen derived from nitrate into cellular substances. |
|
|
MF |
metal ion binding |
Interacting selectively and non-covalently with any metal ion. |
|
|
MF |
ferredoxin-nitrate reductase activity |
Catalysis of the reaction: nitrite + H2O + 2 oxidized ferredoxin = nitrate + 2 reduced ferredoxin. |
|
|
CC |
apoplast |
The cell membranes and intracellular regions in a plant are connected through plasmodesmata, and plants may be described as having two major compartments: the living symplast and the non-living apoplast. The apoplast is external to the plasma membrane and |
|
|
MF |
ferredoxin-nitrite reductase activity |
Catalysis of the reaction: NH3 + 2 H2O + 6 oxidized ferredoxin = nitrite + 6 reduced ferredoxin + 7 H+. |
|
|
MF |
nitrite reductase (NO-forming) activity |
Catalysis of the reaction: nitric oxide + H2O + ferricytochrome c = nitrite + ferrocytochrome c + 2 H+. |
|
|
MF |
4 iron, 4 sulfur cluster binding |
Interacting selectively and non-covalently with a 4 iron, 4 sulfur (4Fe-4S) cluster; this cluster consists of four iron atoms, with the inorganic sulfur atoms found between the irons and acting as bridging ligands. |
|
|
BP |
oxidation-reduction process |
A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |