SuCComBase

Sulfur Containing Compound Database

Potential SCC Gene Description

Gene name CARB
AGI ID AT1G29900
Gene length 1187
Uniprot ID Q42601
Protein Name Carbamoyl-phosphate synthase large chain, chloroplastic
Synonym VEN3
EC number 6.3.5.5
Entrez Gene 839868
Refseq mrna NM_102730.2
Refseq protein NP_564338.1
Database
GO ID Ontology GO Term Description

GO:0000050

BP

urea cycle

The sequence of reactions by which arginine is synthesized from ornithine, then cleaved to yield urea and regenerate ornithine. The overall reaction equation is NH3 + CO2 + aspartate + 3 ATP + 2 H2O = urea + fumarate + 2 ADP + 2 phosphate + AMP + diphosph

GO:0004087

MF

carbamoyl-phosphate synthase (ammonia) activity

Catalysis of the reaction: ATP + biotin-carboxyl-carrier protein + CO2 = ADP + phosphate + carboxybiotin-carboxyl-carrier protein.

GO:0004088

MF

carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity

Catalysis of the reaction: 2 ATP + L-glutamine + CO2 + H2O = 2 ADP + phosphate + glutamate + carbamoyl phosphate.

GO:0005524

MF

ATP binding

Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.

GO:0005739

CC

mitochondrion

A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.

GO:0005951

CC

carbamoyl-phosphate synthase complex

A protein complex that catalyzes the formation of carbamoyl phosphate; comprises a small subunit that binds and cleaves glutamine, and a large subunit that accepts the ammonia group cleaved from glutamine, binds all of the remaining substrates and effecto

GO:0006526

BP

arginine biosynthetic process

The chemical reactions and pathways resulting in the formation of arginine, 2-amino-5-(carbamimidamido)pentanoic acid.

GO:0009507

CC

chloroplast

A chlorophyll-containing plastid with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma.

GO:0009570

CC

chloroplast stroma

The space enclosed by the double membrane of a chloroplast but excluding the thylakoid space. It contains DNA, ribosomes and some temporary products of photosynthesis.

GO:0016020

CC

membrane

A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.

GO:0016036

BP

cellular response to phosphate starvation

Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of phosphate.

GO:0044205

BP

'de novo' UMP biosynthetic process

The chemical reactions and pathways resulting in the formation of UMP, uridine monophosphate, starting with the synthesis of (S)-dihydroorotate from bicarbonate; UMP biosynthesis may either occur via reduction by quinone, NAD(+) or oxygen.

GO:0046872

MF

metal ion binding

Interacting selectively and non-covalently with any metal ion.