SuCComBase

Sulfur Containing Compound Database

Potential SCC Gene Description

Gene name ATL80
AGI ID AT1G20823
Gene length 197
Uniprot ID Q9LM69
Protein Name RING-H2 finger protein ATL80
Synonym At1g20823
EC number 2.3.2.27
Entrez Gene 838674
Refseq mrna NM_101935.3
Refseq protein NP_173506.1
Database ATTED
ATTED
ATTED
ATTED
ATTED
ATTED
ATTED
ATTED
GO ID Ontology GO Term Description

GO:0005886

CC

plasma membrane

The membrane surrounding a cell that separates the cell from its external environment. It consists of a phospholipid bilayer and associated proteins.

GO:0006952

BP

defense response

Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack.

GO:0008270

MF

zinc ion binding

Interacting selectively and non-covalently with zinc (Zn) ions.

GO:0009507

CC

chloroplast

A chlorophyll-containing plastid with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma.

GO:0009909

BP

regulation of flower development

Any process that modulates the frequency, rate or extent of flower development.

GO:0010200

BP

response to chitin

A process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a chitin stimulus.

GO:0010966

BP

regulation of phosphate transport

Any process that modulates the frequency, rate or extent of phosphate transport. Phosphate transport is the directed movement of phosphate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.

GO:0016021

CC

integral component of membrane

The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.

GO:0016567

BP

protein ubiquitination

The process in which one or more ubiquitin groups are added to a protein.

GO:0043161

BP

proteasome-mediated ubiquitin-dependent protein catabolic process

The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, and mediated by the proteasome.

GO:0046872

MF

metal ion binding

Interacting selectively and non-covalently with any metal ion.

GO:0061630

MF

ubiquitin protein ligase activity

Catalysis of the transfer of ubiquitin to a substrate protein via the reaction X-ubiquitin + S -> X + S-ubiquitin, where X is either an E2 or E3 enzyme, the X-ubiquitin linkage is a thioester bond, and the S-ubiquitin linkage is an amide bond: an isopepti

GO:0070417

BP

cellular response to cold

Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cold stimulus, a temperature stimulus below the optimal temperature for that organism.