SuCComBase

Sulfur Containing Compound Database

SCC Gene Description

Gene name NSP5
AGI ID AT5G48180
Gene length 326
Uniprot ID Q93XW5
Protein Name Nitrile-specifier protein 5
Synonym MIF21.7
EC number N/A
Entrez Gene 834871
Refseq mrna NM_124193
Refseq protein NP_568692
Function The seed content of the precursor GSL; 4-methylthiobutylGSL was consistently reduced in nsp3-2; nsp4-1 and nsp5-1 relative to WT (Wittstock et al. 2016)
Group GSL degradation
Reference Wittstock & Burow (2010); Kuchernig et al. (2012)
Organism AGI ID Gene Name Protein Name Identity E-Value Description

Cabbage

AT5G48180

NSP5

Nitrile-specifier protein 5

86

0.00E+00

Cabbage

AT5G48180

NSP5

Nitrile-specifier protein 5

85

0.00E+00

Cabbage

AT5G48180

NSP5

Nitrile-specifier protein 5

57

6.00E-129

Cabbage

AT5G48180

NSP5

Nitrile-specifier protein 5

53

4.00E-121

Papaya

AT5G48180

NSP5

Nitrile-specifier protein 5

57

1.00E-119

Cabbage

AT5G48180

NSP5

Nitrile-specifier protein 5

55

8.00E-107

Cabbage

AT5G48180

NSP5

Nitrile-specifier protein 5

49

5.00E-103

Broccoli

AT5G48180

NSP5

Nitrile-specifier protein 5

48

3.00E-100

Broccoli

AT5G48180

NSP5

Nitrile-specifier protein 5

48

3.00E-100

Cabbage

AT5G48180

NSP5

Nitrile-specifier protein 5

47

3.00E-100

Broccoli

AT5G48180

NSP5

Nitrile-specifier protein 5

48

7.00E-100

Broccoli

AT5G48180

NSP5

Nitrile-specifier protein 5

48

3.00E-99

Cabbage

AT5G48180

NSP5

Nitrile-specifier protein 5

47

4.00E-98

Broccoli

AT5G48180

NSP5

Nitrile-specifier protein 5

46

9.00E-98

Cabbage

AT5G48180

NSP5

Nitrile-specifier protein 5

56

1.00E-97

Cabbage

AT5G48180

NSP5

Nitrile-specifier protein 5

48

3.00E-97

Cabbage

AT5G48180

NSP5

Nitrile-specifier protein 5

47

1.00E-94

Cabbage

AT5G48180

NSP5

Nitrile-specifier protein 5

47

3.00E-88

Broccoli

AT5G48180

NSP5

Nitrile-specifier protein 5

45

6.00E-67

GO ID Ontology GO Term Description

GO:0003674

MF

molecular_function_unknown

A molecular process that can be carried out by the action of a single macromolecular machine, usually via direct physical interactions with other molecular entities. Function in this sense denotes an action, or activity, that a gene product (or a complex)

GO:0005737

CC

cytoplasm

All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

GO:0005829

CC

cytosol

The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.

GO:0019762

BP

glucosinolate catabolic process

The chemical reactions and pathways resulting in the breakdown of glucosinolates, substituted thioglucosides found in rapeseed products and related cruciferae.

GO:0080028

BP

nitrile biosynthetic process

The chemical reactions and pathways resulting in the formation of a nitrile, an organic compound containing trivalent nitrogen attached to one carbon atom.

GO:0003674

MF

molecular_function_unknown

A molecular process that can be carried out by the action of a single macromolecular machine, usually via direct physical interactions with other molecular entities. Function in this sense denotes an action, or activity, that a gene product (or a complex)

GO:0005737

CC

cytoplasm

All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

GO:0005829

CC

cytosol

The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.

GO:0019762

BP

glucosinolate catabolic process

The chemical reactions and pathways resulting in the breakdown of glucosinolates, substituted thioglucosides found in rapeseed products and related cruciferae.

GO:0080028

BP

nitrile biosynthetic process

The chemical reactions and pathways resulting in the formation of a nitrile, an organic compound containing trivalent nitrogen attached to one carbon atom.

GO:0003674

MF

molecular_function_unknown

A molecular process that can be carried out by the action of a single macromolecular machine, usually via direct physical interactions with other molecular entities. Function in this sense denotes an action, or activity, that a gene product (or a complex)

GO:0005737

CC

cytoplasm

All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

GO:0005829

CC

cytosol

The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.

GO:0019762

BP

glucosinolate catabolic process

The chemical reactions and pathways resulting in the breakdown of glucosinolates, substituted thioglucosides found in rapeseed products and related cruciferae.

GO:0080028

BP

nitrile biosynthetic process

The chemical reactions and pathways resulting in the formation of a nitrile, an organic compound containing trivalent nitrogen attached to one carbon atom.

GO:0003674

MF

molecular_function_unknown

A molecular process that can be carried out by the action of a single macromolecular machine, usually via direct physical interactions with other molecular entities. Function in this sense denotes an action, or activity, that a gene product (or a complex)

GO:0005737

CC

cytoplasm

All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

GO:0005829

CC

cytosol

The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.

GO:0019762

BP

glucosinolate catabolic process

The chemical reactions and pathways resulting in the breakdown of glucosinolates, substituted thioglucosides found in rapeseed products and related cruciferae.

GO:0080028

BP

nitrile biosynthetic process

The chemical reactions and pathways resulting in the formation of a nitrile, an organic compound containing trivalent nitrogen attached to one carbon atom.

GO:0003674

MF

molecular_function_unknown

A molecular process that can be carried out by the action of a single macromolecular machine, usually via direct physical interactions with other molecular entities. Function in this sense denotes an action, or activity, that a gene product (or a complex)

GO:0005737

CC

cytoplasm

All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

GO:0005829

CC

cytosol

The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.

GO:0019762

BP

glucosinolate catabolic process

The chemical reactions and pathways resulting in the breakdown of glucosinolates, substituted thioglucosides found in rapeseed products and related cruciferae.

GO:0080028

BP

nitrile biosynthetic process

The chemical reactions and pathways resulting in the formation of a nitrile, an organic compound containing trivalent nitrogen attached to one carbon atom.

GO:0003674

MF

molecular_function_unknown

A molecular process that can be carried out by the action of a single macromolecular machine, usually via direct physical interactions with other molecular entities. Function in this sense denotes an action, or activity, that a gene product (or a complex)

GO:0005737

CC

cytoplasm

All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

GO:0005829

CC

cytosol

The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.

GO:0019762

BP

glucosinolate catabolic process

The chemical reactions and pathways resulting in the breakdown of glucosinolates, substituted thioglucosides found in rapeseed products and related cruciferae.

GO:0080028

BP

nitrile biosynthetic process

The chemical reactions and pathways resulting in the formation of a nitrile, an organic compound containing trivalent nitrogen attached to one carbon atom.

GO:0003674

MF

molecular_function_unknown

A molecular process that can be carried out by the action of a single macromolecular machine, usually via direct physical interactions with other molecular entities. Function in this sense denotes an action, or activity, that a gene product (or a complex)

GO:0005737

CC

cytoplasm

All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

GO:0005829

CC

cytosol

The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.

GO:0019762

BP

glucosinolate catabolic process

The chemical reactions and pathways resulting in the breakdown of glucosinolates, substituted thioglucosides found in rapeseed products and related cruciferae.

GO:0080028

BP

nitrile biosynthetic process

The chemical reactions and pathways resulting in the formation of a nitrile, an organic compound containing trivalent nitrogen attached to one carbon atom.

GO:0003674

MF

molecular_function_unknown

A molecular process that can be carried out by the action of a single macromolecular machine, usually via direct physical interactions with other molecular entities. Function in this sense denotes an action, or activity, that a gene product (or a complex)

GO:0005737

CC

cytoplasm

All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

GO:0005829

CC

cytosol

The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.

GO:0019762

BP

glucosinolate catabolic process

The chemical reactions and pathways resulting in the breakdown of glucosinolates, substituted thioglucosides found in rapeseed products and related cruciferae.

GO:0080028

BP

nitrile biosynthetic process

The chemical reactions and pathways resulting in the formation of a nitrile, an organic compound containing trivalent nitrogen attached to one carbon atom.

Pubmed ID Authors Year Title Journal Description

22303260

Wittstock, U. & Burow, M.

2010

Glucosinolate breakdown in Arabidopsis: mechanism, regulation and biological Significance

Arabidopsis Book

22839361

Kuchernig, J.C., Burow, M. & Wittstock, U.

2012

Evolution of specifier proteins in glucosinolate-containing plants

BMC Evol Biol