SuCComBase

Sulfur Containing Compound Database

SCC Gene Description

Gene name CYP79B2
AGI ID AT4G39950
Gene length 541
Uniprot ID O81346
Protein Name Tryptophan N-monooxygenase 1
Synonym T5J17.120
EC number EC 1.14.13.125
Entrez Gene 830154
Refseq mrna NM_120158
Refseq protein NP_195705
Function Two Arabidopsis cytochrome P450s (CYP79B2 and CYP79B3) are able to convert Trp to indole-3-acetaldoxime (IAOx); a precursor to indole-3-acetic acid (IAA) and indole GSLs (Hull et al. 2000)
Group GSL core structure synthesis / Camalexin biosynthesis
Reference Hull et al. (2000); Mikkelsen et al. (2000); Zhao et al. (2015); Savatin et al. (2015); Lemarié et al. (2015); Kettles et al. (2013); Zandalinas et al. (2012); Wang et al. (2012); Su et al. (2011); Stefanato et al. (2009); Böttcher et al. (2009); Nafisi e
Organism AGI ID Gene Name Protein Name Identity E-Value Description

Broccoli

AT4G39950

CYP79B2

Tryptophan N-monooxygenase 1

94

0.00E+00

Broccoli

AT4G39950

CYP79B2

Tryptophan N-monooxygenase 1

94

0.00E+00

Cabbage

AT4G39950

CYP79B2

Tryptophan N-monooxygenase 1

94

0.00E+00

Cabbage

AT4G39950

CYP79B2

Tryptophan N-monooxygenase 1

94

0.00E+00

Cabbage

AT4G39950

CYP79B2

Tryptophan N-monooxygenase 1

95

0.00E+00

Broccoli

AT4G39950

CYP79B2

Tryptophan N-monooxygenase 1

95

0.00E+00

Cabbage

AT4G39950

CYP79B2

Tryptophan N-monooxygenase 1

86

0.00E+00

Papaya

AT4G39950

CYP79B2

Tryptophan N-monooxygenase 1

60

0.00E+00

Papaya

AT4G39950

CYP79B2

Tryptophan N-monooxygenase 1

58

0.00E+00

Papaya

AT4G39950

CYP79B2

Tryptophan N-monooxygenase 1

58

0.00E+00

Cabbage

AT4G39950

CYP79B2

Tryptophan N-monooxygenase 1

50

2.00E-179

Cabbage

AT4G39950

CYP79B2

Tryptophan N-monooxygenase 1

51

9.00E-171

Broccoli

AT4G39950

CYP79B2

Tryptophan N-monooxygenase 1

47

4.00E-153

Cabbage

AT4G39950

CYP79B2

Tryptophan N-monooxygenase 1

46

9.00E-152

Cabbage

AT4G39950

CYP79B2

Tryptophan N-monooxygenase 1

45

1.00E-150

Cabbage

AT4G39950

CYP79B2

Tryptophan N-monooxygenase 1

45

9.00E-145

Broccoli

AT4G39950

CYP79B2

Tryptophan N-monooxygenase 1

45

7.00E-143

Broccoli

AT4G39950

CYP79B2

Tryptophan N-monooxygenase 1

47

2.00E-138

Cabbage

AT4G39950

CYP79B2

Tryptophan N-monooxygenase 1

46

4.00E-136

Broccoli

AT4G39950

CYP79B2

Tryptophan N-monooxygenase 1

42

1.00E-130

Cabbage

AT4G39950

CYP79B2

Tryptophan N-monooxygenase 1

41

8.00E-130

GO ID Ontology GO Term Description

GO:0002229

BP

defense response to oomycetes

Reactions triggered in response to the presence of oomycetes that act to protect the cell or organism

GO:0004497

MF

monooxygenase activity

Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water.

GO:0005506

MF

iron ion binding

Interacting selectively and non-covalently with iron (Fe) ions.

GO:0006569

BP

tryptophan catabolic process

The chemical reactions and pathways resulting in the breakdown of tryptophan, the chiral amino acid 2-amino-3-(1H-indol-3-yl)propanoic acid.

GO:0006952

BP

defense response

Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack.

GO:0009414

BP

response to water deprivation

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a water deprivation stimulus, prolonged deprivation of water.

GO:0009507

CC

chloroplast

A chlorophyll-containing plastid with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma.

GO:0009617

BP

response to bacterium

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a bacterium.

GO:0009625

BP

response to insect

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from an insect.

GO:0009682

BP

induced systemic resistance

A response to non-pathogenic bacteria that confers broad spectrum systemic resistance to disease that does not depend upon salicylic acid signaling.

GO:0009684

BP

indoleacetic acid biosynthetic process

The chemical reactions and pathways resulting in the formation of indole-3-acetic acid, a compound which functions as a growth regulator in plants.

GO:0010120

BP

camalexin biosynthetic process

The chemical reactions and pathways resulting in the formation of camalexin, an indole phytoalexin.

GO:0016020

CC

membrane

A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.

GO:0016021

CC

integral component of membrane

The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.

GO:0016705

MF

oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from each of two donors, and molecular oxygen is reduced or incorporated into a donor.

GO:0016709

MF

oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen

Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from NADH or NADPH and one other donor, and one atom of oxygen is incorporated into one donor.

GO:0019761

BP

glucosinolate biosynthetic process

The chemical reactions and pathways resulting in the formation of glucosinolates, substituted thioglucosides found in rapeseed products and related cruciferae.

GO:0019825

MF

oxygen binding

Interacting selectively and non-covalently with oxygen (O2).

GO:0020037

MF

heme binding

Interacting selectively and non-covalently with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring.

GO:0042742

BP

defense response to bacterium

Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism.

GO:0052544

BP

defense response by callose deposition in cell wall

Any process in which callose is transported to, and/or maintained in, the cell wall during the defense response. Callose is a linear 1,3-beta-d-glucan formed from UDP-glucose and is found in certain plant cell walls.

GO:0055114

BP

oxidation-reduction process

A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.

GO:0002229

BP

defense response to oomycetes

Reactions triggered in response to the presence of oomycetes that act to protect the cell or organism

GO:0004497

MF

monooxygenase activity

Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water.

GO:0005506

MF

iron ion binding

Interacting selectively and non-covalently with iron (Fe) ions.

GO:0006569

BP

tryptophan catabolic process

The chemical reactions and pathways resulting in the breakdown of tryptophan, the chiral amino acid 2-amino-3-(1H-indol-3-yl)propanoic acid.

GO:0006952

BP

defense response

Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack.

GO:0009414

BP

response to water deprivation

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a water deprivation stimulus, prolonged deprivation of water.

GO:0009507

CC

chloroplast

A chlorophyll-containing plastid with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma.

GO:0009617

BP

response to bacterium

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a bacterium.

GO:0009625

BP

response to insect

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from an insect.

GO:0009682

BP

induced systemic resistance

A response to non-pathogenic bacteria that confers broad spectrum systemic resistance to disease that does not depend upon salicylic acid signaling.

GO:0009684

BP

indoleacetic acid biosynthetic process

The chemical reactions and pathways resulting in the formation of indole-3-acetic acid, a compound which functions as a growth regulator in plants.

GO:0010120

BP

camalexin biosynthetic process

The chemical reactions and pathways resulting in the formation of camalexin, an indole phytoalexin.

GO:0016020

CC

membrane

A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.

GO:0016021

CC

integral component of membrane

The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.

GO:0016705

MF

oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from each of two donors, and molecular oxygen is reduced or incorporated into a donor.

GO:0016709

MF

oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen

Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from NADH or NADPH and one other donor, and one atom of oxygen is incorporated into one donor.

GO:0019761

BP

glucosinolate biosynthetic process

The chemical reactions and pathways resulting in the formation of glucosinolates, substituted thioglucosides found in rapeseed products and related cruciferae.

GO:0019825

MF

oxygen binding

Interacting selectively and non-covalently with oxygen (O2).

GO:0020037

MF

heme binding

Interacting selectively and non-covalently with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring.

GO:0042742

BP

defense response to bacterium

Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism.

GO:0052544

BP

defense response by callose deposition in cell wall

Any process in which callose is transported to, and/or maintained in, the cell wall during the defense response. Callose is a linear 1,3-beta-d-glucan formed from UDP-glucose and is found in certain plant cell walls.

GO:0055114

BP

oxidation-reduction process

A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.

GO:0002229

BP

defense response to oomycetes

Reactions triggered in response to the presence of oomycetes that act to protect the cell or organism

GO:0004497

MF

monooxygenase activity

Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water.

GO:0005506

MF

iron ion binding

Interacting selectively and non-covalently with iron (Fe) ions.

GO:0006569

BP

tryptophan catabolic process

The chemical reactions and pathways resulting in the breakdown of tryptophan, the chiral amino acid 2-amino-3-(1H-indol-3-yl)propanoic acid.

GO:0006952

BP

defense response

Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack.

GO:0009414

BP

response to water deprivation

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a water deprivation stimulus, prolonged deprivation of water.

GO:0009507

CC

chloroplast

A chlorophyll-containing plastid with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma.

GO:0009617

BP

response to bacterium

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a bacterium.

GO:0009625

BP

response to insect

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from an insect.

GO:0009682

BP

induced systemic resistance

A response to non-pathogenic bacteria that confers broad spectrum systemic resistance to disease that does not depend upon salicylic acid signaling.

GO:0009684

BP

indoleacetic acid biosynthetic process

The chemical reactions and pathways resulting in the formation of indole-3-acetic acid, a compound which functions as a growth regulator in plants.

GO:0010120

BP

camalexin biosynthetic process

The chemical reactions and pathways resulting in the formation of camalexin, an indole phytoalexin.

GO:0016020

CC

membrane

A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.

GO:0016021

CC

integral component of membrane

The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.

GO:0016705

MF

oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from each of two donors, and molecular oxygen is reduced or incorporated into a donor.

GO:0016709

MF

oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen

Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from NADH or NADPH and one other donor, and one atom of oxygen is incorporated into one donor.

GO:0019761

BP

glucosinolate biosynthetic process

The chemical reactions and pathways resulting in the formation of glucosinolates, substituted thioglucosides found in rapeseed products and related cruciferae.

GO:0019825

MF

oxygen binding

Interacting selectively and non-covalently with oxygen (O2).

GO:0020037

MF

heme binding

Interacting selectively and non-covalently with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring.

GO:0042742

BP

defense response to bacterium

Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism.

GO:0052544

BP

defense response by callose deposition in cell wall

Any process in which callose is transported to, and/or maintained in, the cell wall during the defense response. Callose is a linear 1,3-beta-d-glucan formed from UDP-glucose and is found in certain plant cell walls.

GO:0055114

BP

oxidation-reduction process

A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.

GO:0002229

BP

defense response to oomycetes

Reactions triggered in response to the presence of oomycetes that act to protect the cell or organism

GO:0004497

MF

monooxygenase activity

Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water.

GO:0005506

MF

iron ion binding

Interacting selectively and non-covalently with iron (Fe) ions.

GO:0006569

BP

tryptophan catabolic process

The chemical reactions and pathways resulting in the breakdown of tryptophan, the chiral amino acid 2-amino-3-(1H-indol-3-yl)propanoic acid.

GO:0006952

BP

defense response

Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack.

GO:0009414

BP

response to water deprivation

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a water deprivation stimulus, prolonged deprivation of water.

GO:0009507

CC

chloroplast

A chlorophyll-containing plastid with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma.

GO:0009617

BP

response to bacterium

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a bacterium.

GO:0009625

BP

response to insect

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from an insect.

GO:0009682

BP

induced systemic resistance

A response to non-pathogenic bacteria that confers broad spectrum systemic resistance to disease that does not depend upon salicylic acid signaling.

GO:0009684

BP

indoleacetic acid biosynthetic process

The chemical reactions and pathways resulting in the formation of indole-3-acetic acid, a compound which functions as a growth regulator in plants.

GO:0010120

BP

camalexin biosynthetic process

The chemical reactions and pathways resulting in the formation of camalexin, an indole phytoalexin.

GO:0016020

CC

membrane

A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.

GO:0016021

CC

integral component of membrane

The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.

GO:0016705

MF

oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from each of two donors, and molecular oxygen is reduced or incorporated into a donor.

GO:0016709

MF

oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen

Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from NADH or NADPH and one other donor, and one atom of oxygen is incorporated into one donor.

GO:0019761

BP

glucosinolate biosynthetic process

The chemical reactions and pathways resulting in the formation of glucosinolates, substituted thioglucosides found in rapeseed products and related cruciferae.

GO:0019825

MF

oxygen binding

Interacting selectively and non-covalently with oxygen (O2).

GO:0020037

MF

heme binding

Interacting selectively and non-covalently with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring.

GO:0042742

BP

defense response to bacterium

Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism.

GO:0052544

BP

defense response by callose deposition in cell wall

Any process in which callose is transported to, and/or maintained in, the cell wall during the defense response. Callose is a linear 1,3-beta-d-glucan formed from UDP-glucose and is found in certain plant cell walls.

GO:0055114

BP

oxidation-reduction process

A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.

GO:0002229

BP

defense response to oomycetes

Reactions triggered in response to the presence of oomycetes that act to protect the cell or organism

GO:0004497

MF

monooxygenase activity

Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water.

GO:0005506

MF

iron ion binding

Interacting selectively and non-covalently with iron (Fe) ions.

GO:0006569

BP

tryptophan catabolic process

The chemical reactions and pathways resulting in the breakdown of tryptophan, the chiral amino acid 2-amino-3-(1H-indol-3-yl)propanoic acid.

GO:0006952

BP

defense response

Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack.

GO:0009414

BP

response to water deprivation

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a water deprivation stimulus, prolonged deprivation of water.

GO:0009507

CC

chloroplast

A chlorophyll-containing plastid with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma.

GO:0009617

BP

response to bacterium

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a bacterium.

GO:0009625

BP

response to insect

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from an insect.

GO:0009682

BP

induced systemic resistance

A response to non-pathogenic bacteria that confers broad spectrum systemic resistance to disease that does not depend upon salicylic acid signaling.

GO:0009684

BP

indoleacetic acid biosynthetic process

The chemical reactions and pathways resulting in the formation of indole-3-acetic acid, a compound which functions as a growth regulator in plants.

GO:0010120

BP

camalexin biosynthetic process

The chemical reactions and pathways resulting in the formation of camalexin, an indole phytoalexin.

GO:0016020

CC

membrane

A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.

GO:0016021

CC

integral component of membrane

The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.

GO:0016705

MF

oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from each of two donors, and molecular oxygen is reduced or incorporated into a donor.

GO:0016709

MF

oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen

Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from NADH or NADPH and one other donor, and one atom of oxygen is incorporated into one donor.

GO:0019761

BP

glucosinolate biosynthetic process

The chemical reactions and pathways resulting in the formation of glucosinolates, substituted thioglucosides found in rapeseed products and related cruciferae.

GO:0019825

MF

oxygen binding

Interacting selectively and non-covalently with oxygen (O2).

GO:0020037

MF

heme binding

Interacting selectively and non-covalently with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring.

GO:0042742

BP

defense response to bacterium

Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism.

GO:0052544

BP

defense response by callose deposition in cell wall

Any process in which callose is transported to, and/or maintained in, the cell wall during the defense response. Callose is a linear 1,3-beta-d-glucan formed from UDP-glucose and is found in certain plant cell walls.

GO:0055114

BP

oxidation-reduction process

A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.

GO:0002229

BP

defense response to oomycetes

Reactions triggered in response to the presence of oomycetes that act to protect the cell or organism

GO:0004497

MF

monooxygenase activity

Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water.

GO:0005506

MF

iron ion binding

Interacting selectively and non-covalently with iron (Fe) ions.

GO:0006569

BP

tryptophan catabolic process

The chemical reactions and pathways resulting in the breakdown of tryptophan, the chiral amino acid 2-amino-3-(1H-indol-3-yl)propanoic acid.

GO:0006952

BP

defense response

Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack.

GO:0009414

BP

response to water deprivation

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a water deprivation stimulus, prolonged deprivation of water.

GO:0009507

CC

chloroplast

A chlorophyll-containing plastid with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma.

GO:0009617

BP

response to bacterium

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a bacterium.

GO:0009625

BP

response to insect

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from an insect.

GO:0009682

BP

induced systemic resistance

A response to non-pathogenic bacteria that confers broad spectrum systemic resistance to disease that does not depend upon salicylic acid signaling.

GO:0009684

BP

indoleacetic acid biosynthetic process

The chemical reactions and pathways resulting in the formation of indole-3-acetic acid, a compound which functions as a growth regulator in plants.

GO:0010120

BP

camalexin biosynthetic process

The chemical reactions and pathways resulting in the formation of camalexin, an indole phytoalexin.

GO:0016020

CC

membrane

A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.

GO:0016021

CC

integral component of membrane

The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.

GO:0016705

MF

oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from each of two donors, and molecular oxygen is reduced or incorporated into a donor.

GO:0016709

MF

oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen

Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from NADH or NADPH and one other donor, and one atom of oxygen is incorporated into one donor.

GO:0019761

BP

glucosinolate biosynthetic process

The chemical reactions and pathways resulting in the formation of glucosinolates, substituted thioglucosides found in rapeseed products and related cruciferae.

GO:0019825

MF

oxygen binding

Interacting selectively and non-covalently with oxygen (O2).

GO:0020037

MF

heme binding

Interacting selectively and non-covalently with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring.

GO:0042742

BP

defense response to bacterium

Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism.

GO:0052544

BP

defense response by callose deposition in cell wall

Any process in which callose is transported to, and/or maintained in, the cell wall during the defense response. Callose is a linear 1,3-beta-d-glucan formed from UDP-glucose and is found in certain plant cell walls.

GO:0055114

BP

oxidation-reduction process

A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.

GO:0002229

BP

defense response to oomycetes

Reactions triggered in response to the presence of oomycetes that act to protect the cell or organism

GO:0004497

MF

monooxygenase activity

Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water.

GO:0005506

MF

iron ion binding

Interacting selectively and non-covalently with iron (Fe) ions.

GO:0006569

BP

tryptophan catabolic process

The chemical reactions and pathways resulting in the breakdown of tryptophan, the chiral amino acid 2-amino-3-(1H-indol-3-yl)propanoic acid.

GO:0006952

BP

defense response

Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack.

GO:0009414

BP

response to water deprivation

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a water deprivation stimulus, prolonged deprivation of water.

GO:0009507

CC

chloroplast

A chlorophyll-containing plastid with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma.

GO:0009617

BP

response to bacterium

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a bacterium.

GO:0009625

BP

response to insect

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from an insect.

GO:0009682

BP

induced systemic resistance

A response to non-pathogenic bacteria that confers broad spectrum systemic resistance to disease that does not depend upon salicylic acid signaling.

GO:0009684

BP

indoleacetic acid biosynthetic process

The chemical reactions and pathways resulting in the formation of indole-3-acetic acid, a compound which functions as a growth regulator in plants.

GO:0010120

BP

camalexin biosynthetic process

The chemical reactions and pathways resulting in the formation of camalexin, an indole phytoalexin.

GO:0016020

CC

membrane

A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.

GO:0016021

CC

integral component of membrane

The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.

GO:0016705

MF

oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from each of two donors, and molecular oxygen is reduced or incorporated into a donor.

GO:0016709

MF

oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen

Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from NADH or NADPH and one other donor, and one atom of oxygen is incorporated into one donor.

GO:0019761

BP

glucosinolate biosynthetic process

The chemical reactions and pathways resulting in the formation of glucosinolates, substituted thioglucosides found in rapeseed products and related cruciferae.

GO:0019825

MF

oxygen binding

Interacting selectively and non-covalently with oxygen (O2).

GO:0020037

MF

heme binding

Interacting selectively and non-covalently with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring.

GO:0042742

BP

defense response to bacterium

Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism.

GO:0052544

BP

defense response by callose deposition in cell wall

Any process in which callose is transported to, and/or maintained in, the cell wall during the defense response. Callose is a linear 1,3-beta-d-glucan formed from UDP-glucose and is found in certain plant cell walls.

GO:0055114

BP

oxidation-reduction process

A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.

GO:0002229

BP

defense response to oomycetes

Reactions triggered in response to the presence of oomycetes that act to protect the cell or organism

GO:0004497

MF

monooxygenase activity

Catalysis of the incorporation of one atom from molecular oxygen into a compound and the reduction of the other atom of oxygen to water.

GO:0005506

MF

iron ion binding

Interacting selectively and non-covalently with iron (Fe) ions.

GO:0006569

BP

tryptophan catabolic process

The chemical reactions and pathways resulting in the breakdown of tryptophan, the chiral amino acid 2-amino-3-(1H-indol-3-yl)propanoic acid.

GO:0006952

BP

defense response

Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack.

GO:0009414

BP

response to water deprivation

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a water deprivation stimulus, prolonged deprivation of water.

GO:0009507

CC

chloroplast

A chlorophyll-containing plastid with thylakoids organized into grana and frets, or stroma thylakoids, and embedded in a stroma.

GO:0009617

BP

response to bacterium

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a bacterium.

GO:0009625

BP

response to insect

Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from an insect.

GO:0009682

BP

induced systemic resistance

A response to non-pathogenic bacteria that confers broad spectrum systemic resistance to disease that does not depend upon salicylic acid signaling.

GO:0009684

BP

indoleacetic acid biosynthetic process

The chemical reactions and pathways resulting in the formation of indole-3-acetic acid, a compound which functions as a growth regulator in plants.

GO:0010120

BP

camalexin biosynthetic process

The chemical reactions and pathways resulting in the formation of camalexin, an indole phytoalexin.

GO:0016020

CC

membrane

A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.

GO:0016021

CC

integral component of membrane

The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.

GO:0016705

MF

oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from each of two donors, and molecular oxygen is reduced or incorporated into a donor.

GO:0016709

MF

oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen

Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from NADH or NADPH and one other donor, and one atom of oxygen is incorporated into one donor.

GO:0019761

BP

glucosinolate biosynthetic process

The chemical reactions and pathways resulting in the formation of glucosinolates, substituted thioglucosides found in rapeseed products and related cruciferae.

GO:0019825

MF

oxygen binding

Interacting selectively and non-covalently with oxygen (O2).

GO:0020037

MF

heme binding

Interacting selectively and non-covalently with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring.

GO:0042742

BP

defense response to bacterium

Reactions triggered in response to the presence of a bacterium that act to protect the cell or organism.

GO:0052544

BP

defense response by callose deposition in cell wall

Any process in which callose is transported to, and/or maintained in, the cell wall during the defense response. Callose is a linear 1,3-beta-d-glucan formed from UDP-glucose and is found in certain plant cell walls.

GO:0055114

BP

oxidation-reduction process

A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.

Pubmed ID Authors Year Title Journal Description

10681464

Hull, A.K., Vij, R. & Celenza, J.L.

2000

Arabidopsis cytochrome P450s that catalyze the first step of tryptophan-dependent indole-3-acetic acid biosynthesis

Proc Natl Acad Sci U S A

10922360

Mikkelsen, M.D., Hansen, C.H., Wittstock, U. & Halkier, B.A.

2000

Cytochrome P450 CYP79B2 from Arabidopsis catalyzes the conversion of tryptophan to indole-3-acetaldoxime, a precursor of indole glucosinolates and indole-3-acetic acid

J Biol Chem

25645692

Zhao, Y., Wang, J., Liu, Y., Miao, H., Cai, C., Shao, Z., Guo, R., Sun, B., Jia, C., Zhang, L., Gigolashvili, T. & Wang, Q.

2015

Classic myrosinase-dependent degradation of indole glucosinolate attenuates fumonisin B1-induced programmed cell death in Arabidopsis

Plant Journal

12529537

Mikkelsen, M.D., Petersen, B.L., Glawischnig, E., Jensen, A.B., Andreasson, E. & Halkier, B.A.

2003

Modulation of CYP79 genes and glucosinolate profiles in Arabidopsis by defense signaling pathways

Plant Physiology

29085857

Savatin, D.V., Bisceglia, N.G., Gravino, M., Fabbri, C., Pontiggia, D. and Mattei, B.

2015

Camalexin Quantification in Arabidopsis thaliana Leaves Infected with Botrytis cinerea.

Bio Protoc

26257750

Lemarié, S., Robert-Seilaniantz, A., Lariagon, C., Lemoine, J., Marnet, N., Levrel, A., Jubault, M., Manzanares-Dauleux, M.J. and Gravot, A.

2015

Camalexin contributes to the partial resistance of Arabidopsis thaliana to the biotrophic soilborne protist Plasmodiophora brassicae.

Front Plant Sci

23528052

Kettles, G.J., Drurey, C., Schoonbeek, H.J., Maule, A.J. and Hogenhout, S.A.

2013

Resistance of Arabidopsis thaliana to the green peach aphid, Myzus persicae, involves camalexin and is regulated by microRNAs.

New Phytol

22870889

Zandalinas, S.I., Vives-Peris, V., Gómez-Cadenas, A. and Arbona, V.

2012

A fast and precise method to identify indolic glucosinolates and camalexin in plants by combining mass spectrometric and biological information.

J Agric Food Chem

22624950

Wang, M.Y., Liu, X.T., Chen, Y., Xu, X.J., Yu, B., Zhang, S.Q., Li, Q. and He, Z.H.

2012

Arabidopsis acetyl-amido synthetase GH3.5 involvement in camalexin biosynthesis through conjugation of indole-3-carboxylic acid and cysteine and upregulation of camalexin biosynthesis genes.

J Integr Plant Biol

21239642

Su, T., Xu, J., Li, Y., Lei, L., Zhao, L., Yang, H., Feng, J., Liu, G. and Ren, D.

2011

Glutathione-indole-3-acetonitrile is required for camalexin biosynthesis in Arabidopsis thaliana.

Plant Cell

19154205

Stefanato, F.L., Abou‐Mansour, E., Buchala, A., Kretschmer, M., Mosbach, A., Hahn, M., Bochet, C.G., Métraux, J.P. and Schoonbeek, H.J.

2009

The ABC transporter BcatrB from Botrytis cinerea exports camalexin and is a virulence factor on Arabidopsis thaliana.

Plant J

19567706

Böttcher, C., Westphal, L., Schmotz, C., Prade, E., Scheel, D. and Glawischnig, E.

2009

The multifunctional enzyme CYP71B15 (PHYTOALEXIN DEFICIENT3) converts cysteine-indole-3-acetonitrile to camalexin in the indole-3-acetonitrile metabolic network of Arabidopsis thaliana.

Plant Cell

17573535

Nafisi, M., Goregaoker, S., Botanga, C.J., Glawischnig, E., Olsen, C.E., Halkier, B.A. and Glazebrook, J.

2007

Arabidopsis cytochrome P450 monooxygenase 71A13 catalyzes the conversion of indole-3-acetaldoxime in camalexin synthesis.

Plant Cell

17217970

Glawischnig, E.

2007

Camalexin.

Phytochemistry

16766671

Schuhegger, R., Nafisi, M., Mansourova, M., Petersen, B.L., Olsen, C.E., Svatoš, A., Halkier, B.A. and Glawischnig, E.

2006

CYP71B15 (PAD3) catalyzes the final step in camalexin biosynthesis.

Plant Physiol

16769150

Schuhegger, R., Rauhut, T. and Glawischnig, E.

2007

Regulatory variability of camalexin biosynthesis.

J Plant Physiol

17073786

Glawischnig, E.

2006

The role of cytochrome P450 enzymes in the biosynthesis of camalexin.

Biochem Soc Trans

20230487

Schlaeppi, K., Abou‐Mansour, E., Buchala, A. and Mauch, F.

2010

Disease resistance of Arabidopsis to Phytophthora brassicae is established by the sequential action of indole glucosinolates and camalexin.

Plant J

15148388

Glawischnig, E., Hansen, B.G., Olsen, C.E. and Halkier, B.A.

2004

Camalexin is synthesized from indole-3-acetaldoxime, a key branching point between primary and secondary metabolism in Arabidopsis.

Proc Natl Acad Sci U S A