SuCComBase

Sulfur Containing Compound Database

SCC Gene Description

Gene name SUR1
AGI ID AT2G20610
Gene length 462
Uniprot ID Q9SIV0
Protein Name S-alkyl-thiohydroximate lyase SUR1
Synonym RTY1
EC number EC 4.4.1.-
Entrez Gene 816585
Refseq mrna NM_201760
Refseq protein NP_973489
Function SUPERROOT1 (SUR1) was characterized as the C-S lyase in GSL biosynthesis. This is supported by selective metabolite profiling of sur1 which is completely devoid of aliphatic and indolic GSLs (Mikkelsen et al. 2004)
Group GSL core structure synthesis / Camalexin biosynthesis
Reference Kong et al. (2015); Mikkelsen et al. (2004); Glawischnig et al. (2004)
Organism AGI ID Gene Name Protein Name Identity E-Value Description

Cabbage

AT2G20610

SUR1

S-alkyl-thiohydroximate lyase SUR1

90

0.00E+00

Cabbage

AT2G20610

SUR1

S-alkyl-thiohydroximate lyase SUR1

86

0.00E+00

Broccoli

AT2G20610

SUR1

S-alkyl-thiohydroximate lyase SUR1

90

0.00E+00

Cabbage

AT2G20610

SUR1

S-alkyl-thiohydroximate lyase SUR1

72

0.00E+00

Broccoli

AT2G20610

SUR1

S-alkyl-thiohydroximate lyase SUR1

63

0.00E+00

Cabbage

AT2G20610

SUR1

S-alkyl-thiohydroximate lyase SUR1

62

0.00E+00

Cabbage

AT2G20610

SUR1

S-alkyl-thiohydroximate lyase SUR1

62

0.00E+00

Papaya

AT2G20610

SUR1

S-alkyl-thiohydroximate lyase SUR1

61

0.00E+00

Papaya

AT2G20610

SUR1

S-alkyl-thiohydroximate lyase SUR1

55

2.00E-175

Cabbage

AT2G20610

SUR1

S-alkyl-thiohydroximate lyase SUR1

60

2.00E-174

Cabbage

AT2G20610

SUR1

S-alkyl-thiohydroximate lyase SUR1

59

3.00E-173

Broccoli

AT2G20610

SUR1

S-alkyl-thiohydroximate lyase SUR1

58

7.00E-170

Broccoli

AT2G20610

SUR1

S-alkyl-thiohydroximate lyase SUR1

68

5.00E-165

Papaya

AT2G20610

SUR1

S-alkyl-thiohydroximate lyase SUR1

55

3.00E-155

Cabbage

AT2G20610

SUR1

S-alkyl-thiohydroximate lyase SUR1

52

3.00E-151

Broccoli

AT2G20610

SUR1

S-alkyl-thiohydroximate lyase SUR1

55

4.00E-151

Cabbage

AT2G20610

SUR1

S-alkyl-thiohydroximate lyase SUR1

48

3.00E-150

Broccoli

AT2G20610

SUR1

S-alkyl-thiohydroximate lyase SUR1

52

4.00E-150

Broccoli

AT2G20610

SUR1

S-alkyl-thiohydroximate lyase SUR1

48

4.00E-149

Cabbage

AT2G20610

SUR1

S-alkyl-thiohydroximate lyase SUR1

48

2.00E-146

Broccoli

AT2G20610

SUR1

S-alkyl-thiohydroximate lyase SUR1

59

6.00E-142

Cabbage

AT2G20610

SUR1

S-alkyl-thiohydroximate lyase SUR1

50

1.00E-136

Cabbage

AT2G20610

SUR1

S-alkyl-thiohydroximate lyase SUR1

51

2.00E-135

Broccoli

AT2G20610

SUR1

S-alkyl-thiohydroximate lyase SUR1

50

5.00E-132

Broccoli

AT2G20610

SUR1

S-alkyl-thiohydroximate lyase SUR1

48

1.00E-131

Cabbage

AT2G20610

SUR1

S-alkyl-thiohydroximate lyase SUR1

48

1.00E-123

Broccoli

AT2G20610

SUR1

S-alkyl-thiohydroximate lyase SUR1

50

2.00E-115

GO ID Ontology GO Term Description

GO:0001560

BP

regulation of cell growth by extracellular stimulus

Any process in which external signals modulate the frequency, rate or extent of cell growth, the irreversible increase in size of a cell over time.

GO:0005737

CC

cytoplasm

All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

GO:0006520

BP

cellular amino acid metabolic process

The chemical reactions and pathways involving amino acids, carboxylic acids containing one or more amino groups, as carried out by individual cells.

GO:0008483

MF

transaminase activity

Catalysis of the transfer of an amino group to an acceptor, usually a 2-oxo acid.

GO:0009684

BP

indoleacetic acid biosynthetic process

The chemical reactions and pathways resulting in the formation of indole-3-acetic acid, a compound which functions as a growth regulator in plants.

GO:0016020

CC

membrane

A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.

GO:0016846

MF

carbon-sulfur lyase activity

Catalysis of the elimination of hydrogen sulfide or substituted H2S.

GO:0019761

BP

glucosinolate biosynthetic process

The chemical reactions and pathways resulting in the formation of glucosinolates, substituted thioglucosides found in rapeseed products and related cruciferae.

GO:0030170

MF

pyridoxal phosphate binding

Interacting selectively and non-covalently with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6.

GO:0048830

BP

adventitious root development

The process whose specific outcome is the progression of adventitious root over time, from its formation to the mature structure. Adventitious roots are post-embryonic roots that develop from the plant shoot.

GO:0080108

MF

S-alkylthiohydroximate lyase activity

Catalysis of the conversion of a S-alkylthiohydroximate to a thiohydroximate.

GO:0001560

BP

regulation of cell growth by extracellular stimulus

Any process in which external signals modulate the frequency, rate or extent of cell growth, the irreversible increase in size of a cell over time.

GO:0005737

CC

cytoplasm

All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

GO:0006520

BP

cellular amino acid metabolic process

The chemical reactions and pathways involving amino acids, carboxylic acids containing one or more amino groups, as carried out by individual cells.

GO:0008483

MF

transaminase activity

Catalysis of the transfer of an amino group to an acceptor, usually a 2-oxo acid.

GO:0009684

BP

indoleacetic acid biosynthetic process

The chemical reactions and pathways resulting in the formation of indole-3-acetic acid, a compound which functions as a growth regulator in plants.

GO:0016020

CC

membrane

A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.

GO:0016846

MF

carbon-sulfur lyase activity

Catalysis of the elimination of hydrogen sulfide or substituted H2S.

GO:0019761

BP

glucosinolate biosynthetic process

The chemical reactions and pathways resulting in the formation of glucosinolates, substituted thioglucosides found in rapeseed products and related cruciferae.

GO:0030170

MF

pyridoxal phosphate binding

Interacting selectively and non-covalently with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6.

GO:0048830

BP

adventitious root development

The process whose specific outcome is the progression of adventitious root over time, from its formation to the mature structure. Adventitious roots are post-embryonic roots that develop from the plant shoot.

GO:0080108

MF

S-alkylthiohydroximate lyase activity

Catalysis of the conversion of a S-alkylthiohydroximate to a thiohydroximate.

GO:0001560

BP

regulation of cell growth by extracellular stimulus

Any process in which external signals modulate the frequency, rate or extent of cell growth, the irreversible increase in size of a cell over time.

GO:0005737

CC

cytoplasm

All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

GO:0006520

BP

cellular amino acid metabolic process

The chemical reactions and pathways involving amino acids, carboxylic acids containing one or more amino groups, as carried out by individual cells.

GO:0008483

MF

transaminase activity

Catalysis of the transfer of an amino group to an acceptor, usually a 2-oxo acid.

GO:0009684

BP

indoleacetic acid biosynthetic process

The chemical reactions and pathways resulting in the formation of indole-3-acetic acid, a compound which functions as a growth regulator in plants.

GO:0016020

CC

membrane

A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.

GO:0016846

MF

carbon-sulfur lyase activity

Catalysis of the elimination of hydrogen sulfide or substituted H2S.

GO:0019761

BP

glucosinolate biosynthetic process

The chemical reactions and pathways resulting in the formation of glucosinolates, substituted thioglucosides found in rapeseed products and related cruciferae.

GO:0030170

MF

pyridoxal phosphate binding

Interacting selectively and non-covalently with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6.

GO:0048830

BP

adventitious root development

The process whose specific outcome is the progression of adventitious root over time, from its formation to the mature structure. Adventitious roots are post-embryonic roots that develop from the plant shoot.

GO:0080108

MF

S-alkylthiohydroximate lyase activity

Catalysis of the conversion of a S-alkylthiohydroximate to a thiohydroximate.

GO:0001560

BP

regulation of cell growth by extracellular stimulus

Any process in which external signals modulate the frequency, rate or extent of cell growth, the irreversible increase in size of a cell over time.

GO:0005737

CC

cytoplasm

All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

GO:0006520

BP

cellular amino acid metabolic process

The chemical reactions and pathways involving amino acids, carboxylic acids containing one or more amino groups, as carried out by individual cells.

GO:0008483

MF

transaminase activity

Catalysis of the transfer of an amino group to an acceptor, usually a 2-oxo acid.

GO:0009684

BP

indoleacetic acid biosynthetic process

The chemical reactions and pathways resulting in the formation of indole-3-acetic acid, a compound which functions as a growth regulator in plants.

GO:0016020

CC

membrane

A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.

GO:0016846

MF

carbon-sulfur lyase activity

Catalysis of the elimination of hydrogen sulfide or substituted H2S.

GO:0019761

BP

glucosinolate biosynthetic process

The chemical reactions and pathways resulting in the formation of glucosinolates, substituted thioglucosides found in rapeseed products and related cruciferae.

GO:0030170

MF

pyridoxal phosphate binding

Interacting selectively and non-covalently with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6.

GO:0048830

BP

adventitious root development

The process whose specific outcome is the progression of adventitious root over time, from its formation to the mature structure. Adventitious roots are post-embryonic roots that develop from the plant shoot.

GO:0080108

MF

S-alkylthiohydroximate lyase activity

Catalysis of the conversion of a S-alkylthiohydroximate to a thiohydroximate.

GO:0001560

BP

regulation of cell growth by extracellular stimulus

Any process in which external signals modulate the frequency, rate or extent of cell growth, the irreversible increase in size of a cell over time.

GO:0005737

CC

cytoplasm

All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

GO:0006520

BP

cellular amino acid metabolic process

The chemical reactions and pathways involving amino acids, carboxylic acids containing one or more amino groups, as carried out by individual cells.

GO:0008483

MF

transaminase activity

Catalysis of the transfer of an amino group to an acceptor, usually a 2-oxo acid.

GO:0009684

BP

indoleacetic acid biosynthetic process

The chemical reactions and pathways resulting in the formation of indole-3-acetic acid, a compound which functions as a growth regulator in plants.

GO:0016020

CC

membrane

A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.

GO:0016846

MF

carbon-sulfur lyase activity

Catalysis of the elimination of hydrogen sulfide or substituted H2S.

GO:0019761

BP

glucosinolate biosynthetic process

The chemical reactions and pathways resulting in the formation of glucosinolates, substituted thioglucosides found in rapeseed products and related cruciferae.

GO:0030170

MF

pyridoxal phosphate binding

Interacting selectively and non-covalently with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6.

GO:0048830

BP

adventitious root development

The process whose specific outcome is the progression of adventitious root over time, from its formation to the mature structure. Adventitious roots are post-embryonic roots that develop from the plant shoot.

GO:0080108

MF

S-alkylthiohydroximate lyase activity

Catalysis of the conversion of a S-alkylthiohydroximate to a thiohydroximate.

GO:0001560

BP

regulation of cell growth by extracellular stimulus

Any process in which external signals modulate the frequency, rate or extent of cell growth, the irreversible increase in size of a cell over time.

GO:0005737

CC

cytoplasm

All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

GO:0006520

BP

cellular amino acid metabolic process

The chemical reactions and pathways involving amino acids, carboxylic acids containing one or more amino groups, as carried out by individual cells.

GO:0008483

MF

transaminase activity

Catalysis of the transfer of an amino group to an acceptor, usually a 2-oxo acid.

GO:0009684

BP

indoleacetic acid biosynthetic process

The chemical reactions and pathways resulting in the formation of indole-3-acetic acid, a compound which functions as a growth regulator in plants.

GO:0016020

CC

membrane

A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.

GO:0016846

MF

carbon-sulfur lyase activity

Catalysis of the elimination of hydrogen sulfide or substituted H2S.

GO:0019761

BP

glucosinolate biosynthetic process

The chemical reactions and pathways resulting in the formation of glucosinolates, substituted thioglucosides found in rapeseed products and related cruciferae.

GO:0030170

MF

pyridoxal phosphate binding

Interacting selectively and non-covalently with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6.

GO:0048830

BP

adventitious root development

The process whose specific outcome is the progression of adventitious root over time, from its formation to the mature structure. Adventitious roots are post-embryonic roots that develop from the plant shoot.

GO:0080108

MF

S-alkylthiohydroximate lyase activity

Catalysis of the conversion of a S-alkylthiohydroximate to a thiohydroximate.

GO:0001560

BP

regulation of cell growth by extracellular stimulus

Any process in which external signals modulate the frequency, rate or extent of cell growth, the irreversible increase in size of a cell over time.

GO:0005737

CC

cytoplasm

All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

GO:0006520

BP

cellular amino acid metabolic process

The chemical reactions and pathways involving amino acids, carboxylic acids containing one or more amino groups, as carried out by individual cells.

GO:0008483

MF

transaminase activity

Catalysis of the transfer of an amino group to an acceptor, usually a 2-oxo acid.

GO:0009684

BP

indoleacetic acid biosynthetic process

The chemical reactions and pathways resulting in the formation of indole-3-acetic acid, a compound which functions as a growth regulator in plants.

GO:0016020

CC

membrane

A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.

GO:0016846

MF

carbon-sulfur lyase activity

Catalysis of the elimination of hydrogen sulfide or substituted H2S.

GO:0019761

BP

glucosinolate biosynthetic process

The chemical reactions and pathways resulting in the formation of glucosinolates, substituted thioglucosides found in rapeseed products and related cruciferae.

GO:0030170

MF

pyridoxal phosphate binding

Interacting selectively and non-covalently with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6.

GO:0048830

BP

adventitious root development

The process whose specific outcome is the progression of adventitious root over time, from its formation to the mature structure. Adventitious roots are post-embryonic roots that develop from the plant shoot.

GO:0080108

MF

S-alkylthiohydroximate lyase activity

Catalysis of the conversion of a S-alkylthiohydroximate to a thiohydroximate.

GO:0001560

BP

regulation of cell growth by extracellular stimulus

Any process in which external signals modulate the frequency, rate or extent of cell growth, the irreversible increase in size of a cell over time.

GO:0005737

CC

cytoplasm

All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.

GO:0006520

BP

cellular amino acid metabolic process

The chemical reactions and pathways involving amino acids, carboxylic acids containing one or more amino groups, as carried out by individual cells.

GO:0008483

MF

transaminase activity

Catalysis of the transfer of an amino group to an acceptor, usually a 2-oxo acid.

GO:0009684

BP

indoleacetic acid biosynthetic process

The chemical reactions and pathways resulting in the formation of indole-3-acetic acid, a compound which functions as a growth regulator in plants.

GO:0016020

CC

membrane

A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.

GO:0016846

MF

carbon-sulfur lyase activity

Catalysis of the elimination of hydrogen sulfide or substituted H2S.

GO:0019761

BP

glucosinolate biosynthetic process

The chemical reactions and pathways resulting in the formation of glucosinolates, substituted thioglucosides found in rapeseed products and related cruciferae.

GO:0030170

MF

pyridoxal phosphate binding

Interacting selectively and non-covalently with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6.

GO:0048830

BP

adventitious root development

The process whose specific outcome is the progression of adventitious root over time, from its formation to the mature structure. Adventitious roots are post-embryonic roots that develop from the plant shoot.

GO:0080108

MF

S-alkylthiohydroximate lyase activity

Catalysis of the conversion of a S-alkylthiohydroximate to a thiohydroximate.

Pubmed ID Authors Year Title Journal Description

25552472

Kong, W., Li, Y., Zhang, M., Jin, F. & Li, J.

2015

A Novel Arabidopsis MicroRNA Promotes IAA Biosynthesis via the Indole-3-acetaldoxime Pathway by Suppressing SUPERROOT1

Plant and Cell Physiology

14871316

Mikkelsen, M.D., Naur, P. & Halkier, B.A.

2004

Arabidopsis mutants in the C–S lyase of glucosinolate biosynthesis establish a critical role for indole-3-acetaldoxime in auxin homeostasis

Plant Journal

15148388

Glawischnig, E., Hansen, B.G., Olsen, C.E. and Halkier, B.A.

2004

Camalexin is synthesized from indole-3-acetaldoxime, a key branching point between primary and secondary metabolism in Arabidopsis.

Proc Natl Acad Sci U S A