SuCComBase

Sulfur Containing Compound Database

SCC Gene Description

Gene name SDI2
AGI ID AT1G04770
Gene length 303
Uniprot ID Q8L730
Protein Name Protein SULFUR DEFICIENCY-INDUCED 2
Synonym F13M7.24
EC number N/A
Entrez Gene 839418
Refseq mrna NM_100355.4.
Refseq protein NP_171969.2
Function Sulfur deficiency induced 1 (SD1) and SD2 are –S marker genes sulfur deficiency that act as major repressors controlling GSL biosynthesis in Arabidopsis under –S condition. SDI1 and SDI2 expression negatively correlated with GSL biosynthesis in both transcript and metabolite levels. Principal components analysis of transcriptome data indicated that SDI1 regulates aliphatic GSL biosynthesis as part of –S response. SDI1 was localized to the nucleus and interacted with MYB28 a major transcription factor that promotes aliphatic GSL biosynthesis in both yeast and plant cells (Aarabi et al. 2016)
Group GSL core structure synthesis
Reference Aarabi et al. (2016)
Organism AGI ID Gene Name Protein Name Identity E-Value Description

Papaya

AT1G04770

SDI2

Protein SULFUR DEFICIENCY-INDUCED 2

68.667

1.82E-143

Papaya

AT1G04770

SDI2

Protein SULFUR DEFICIENCY-INDUCED 2

65.845

9.02E-123

Papaya

AT1G04770

SDI2

Protein SULFUR DEFICIENCY-INDUCED 2

60.435

1.26E-89

Papaya

AT1G04770

SDI2

Protein SULFUR DEFICIENCY-INDUCED 2

62.085

9.41E-80

Broccoli

AT1G04770

SDI2

Protein SULFUR DEFICIENCY-INDUCED 2

87.5

5.15E-174

Broccoli

AT1G04770

SDI2

Protein SULFUR DEFICIENCY-INDUCED 2

83.624

1.66E-152

Broccoli

AT1G04770

SDI2

Protein SULFUR DEFICIENCY-INDUCED 2

59.507

1.60E-114

Broccoli

AT1G04770

SDI2

Protein SULFUR DEFICIENCY-INDUCED 2

58.333

2.21E-112

Broccoli

AT1G04770

SDI2

Protein SULFUR DEFICIENCY-INDUCED 2

57.343

1.53E-106

Broccoli

AT1G04770

SDI2

Protein SULFUR DEFICIENCY-INDUCED 2

61.78

6.19E-76

Broccoli

AT1G04770

SDI2

Protein SULFUR DEFICIENCY-INDUCED 2

50.199

7.93E-75

Broccoli

AT1G04770

SDI2

Protein SULFUR DEFICIENCY-INDUCED 2

56.545

2.27E-64

Cabbage

AT1G04770

SDI2

Protein SULFUR DEFICIENCY-INDUCED 2

89.037

2.10E-176

Cabbage

AT1G04770

SDI2

Protein SULFUR DEFICIENCY-INDUCED 2

85.714

1.74E-158

Cabbage

AT1G04770

SDI2

Protein SULFUR DEFICIENCY-INDUCED 2

60.211

1.48E-116

Cabbage

AT1G04770

SDI2

Protein SULFUR DEFICIENCY-INDUCED 2

60.14

3.60E-116

Cabbage

AT1G04770

SDI2

Protein SULFUR DEFICIENCY-INDUCED 2

59.507

2.48E-115

Cabbage

AT1G04770

SDI2

Protein SULFUR DEFICIENCY-INDUCED 2

61.304

2.77E-90

Cabbage

AT1G04770

SDI2

Protein SULFUR DEFICIENCY-INDUCED 2

60.829

5.87E-85

Cabbage

AT1G04770

SDI2

Protein SULFUR DEFICIENCY-INDUCED 2

50.199

3.21E-75

Cabbage

AT1G04770

SDI2

Protein SULFUR DEFICIENCY-INDUCED 2

50.439

6.46E-70

GO ID Ontology GO Term Description

GO:0009658

BP

chloroplast organization

A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the chloroplast.

GO:0010439

BP

regulation of glucosinolate biosynthetic process

Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of glucosinolates, substituted thioglucosides found in rapeseed products and related cruciferae.

GO:0009658

BP

chloroplast organization

A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the chloroplast.

GO:0010439

BP

regulation of glucosinolate biosynthetic process

Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of glucosinolates, substituted thioglucosides found in rapeseed products and related cruciferae.

GO:0009658

BP

chloroplast organization

A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the chloroplast.

GO:0010439

BP

regulation of glucosinolate biosynthetic process

Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of glucosinolates, substituted thioglucosides found in rapeseed products and related cruciferae.

GO:0009658

BP

chloroplast organization

A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the chloroplast.

GO:0010439

BP

regulation of glucosinolate biosynthetic process

Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of glucosinolates, substituted thioglucosides found in rapeseed products and related cruciferae.

GO:0009658

BP

chloroplast organization

A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the chloroplast.

GO:0010439

BP

regulation of glucosinolate biosynthetic process

Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of glucosinolates, substituted thioglucosides found in rapeseed products and related cruciferae.

GO:0009658

BP

chloroplast organization

A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the chloroplast.

GO:0010439

BP

regulation of glucosinolate biosynthetic process

Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of glucosinolates, substituted thioglucosides found in rapeseed products and related cruciferae.

GO:0009658

BP

chloroplast organization

A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the chloroplast.

GO:0010439

BP

regulation of glucosinolate biosynthetic process

Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of glucosinolates, substituted thioglucosides found in rapeseed products and related cruciferae.

GO:0009658

BP

chloroplast organization

A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the chloroplast.

GO:0010439

BP

regulation of glucosinolate biosynthetic process

Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of glucosinolates, substituted thioglucosides found in rapeseed products and related cruciferae.

Pubmed ID Authors Year Title Journal Description

27730214

Aarabi, F., Kusajima, M., Tohge, T., Konishi, T., Gigolashvili, T., Takamune, M., Sasazaki, Y., Watanabe, M., Nakashita, H., Fernie, A.R., Saito, K., Takahashi, H., Hubberten, H.-M., Hoefgen, R. & Maruyama-Nakashita, A.

2016

Sulfur deficiency-induced repressor proteins optimize glucosinolate biosynthesis in plants

Science Advances